Subtercola endophyticus: LQ955_14840
Help
Entry
LQ955_14840 CDS
T08409
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
suba
Subtercola endophyticus
Pathway
suba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ955_14840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
suba02000
]
LQ955_14840
Transporters [BR:
suba02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LQ955_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_16
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_23
DO-GTPase2
MMR_HSR1
Mg_chelatase
nSTAND1
ATP-synt_ab
DUF87
nSTAND3
FtsK_SpoIIIE
Sigma54_activat
NACHT
AAA_7
AIG1
DLIC
Motif
Other DBs
NCBI-ProteinID:
UFS58278
LinkDB
All DBs
Position
complement(3199186..3201090)
Genome browser
AA seq
634 aa
AA seq
DB search
MSAQVTGVPRLADSKGVVTAPDARQTPIVEITNLSVTYSREGRKSAAVSDLTLAIAAGET
VAIVGESGSGKSTTANALLGLLPSGGEVSGGSIRIDGADTTHASEKVLRSIRGRVIGLVP
QDPMVALNPTLRIGPQVAEAVRRRGDVPKRSLDSEVVEVLEAAGLDNPVLRARQYPHELS
GGMRQRVLIAIALAGRPQLIVADEPTSALDVTVQKRILDHLQSLVRDRGISLLIITHDLG
VAADRADRVLVMQGGRVVEQGRPAEILVAPAEDYTRRLIAAAPGLSSDGRVKIRHAGGSA
AVADRAGAPAAVAAADAAETATPILSIVGVTKDYRLPRSPEGQRTFRAIDSVSIDVPAGQ
TVGLVGESGSGKTTTLRVALGLEKPTAGRVLFEGVDITDAGWRELRPLRKRFQLVHQNPF
SSLDPKFTVGQSILEPLVSFGVGDRASRSARLRELLDQVALPTAFADRRPAELSGGQRQR
VAIARALALKPDLVFLDEPVSALDVSVQEQILTLLATLQDELGLSYLFISHDLAVVAQLA
HRVAVLNRGVLVEQGATIDVFANPQSDYTKALLDAIPGRSTAVAPARDGVAAATSRAVSS
GTASVAAATSSAASSGVASGTASAPTDSREEVPS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcaggtgactggcgtgcctcggctcgcggattcgaaaggtgtcgtcaccgct
ccggatgcccggcagacgcccatcgtcgagatcaccaatctctcggtgacgtatagccgc
gaggggcgcaagtctgccgccgtctccgacctgacgctggccatcgccgcgggcgagacg
gtcgcgatcgtgggcgagtccggttcgggaaagagcaccacggcgaacgccctgctcggg
ctgctgccgagcggcggagaggtgtcgggcgggtcgatccgcatcgatggcgccgacacg
acccacgcgtcagagaaggtgctgcggagcatccggggccgcgtgatcgggcttgtaccg
caagacccgatggtcgccctcaacccgacgctgcgcatcgggccgcaggtggccgaggcg
gttcgccgccgcggagacgtgccgaagcgctcgctcgactccgaagtggtggaggtgctc
gaagcggcaggcctcgacaaccccgtacttcgggcacggcaatacccgcacgagctgtcg
ggcggcatgcggcagcgggtgctgatcgccatcgccttggccgggcggccgcagctgatc
gtggccgacgagccgaccagcgcgctcgatgtcaccgtgcagaagcgcattctcgaccac
ctgcagtcgctggttcgggatcgcggcatttcgctgctcatcatcacgcacgacctgggt
gtcgcggccgaccgcgccgaccgggtgctggtgatgcagggcggccgcgtggtggagcag
ggccggccggccgagattctggtggcgccggcagaggactacacacggcggctgatcgcc
gcggcgccggggctgagcagcgacgggcgggtgaagattaggcatgcgggcggttcggct
gcggtcgccgaccgcgcgggcgcgcctgccgccgttgccgctgccgatgccgccgagacg
gccacgccgattctctcgatcgtcggagtcacgaaagattaccggctgccgcgctcacct
gaggggcagcgtacgttccgggcgatcgactcggtgtcgatcgatgtacccgcgggccag
accgtcgggctggtcggcgagtcggggtcgggcaagaccaccacgctgcgtgtcgcgctg
gggctcgagaaacccacagccggccgagtgctgttcgaaggcgtcgacatcaccgacgcg
ggctggcgcgagctgcgtccgttgcgcaagcggtttcagctcgtgcatcagaatccgttc
tcgtcgctcgaccccaagttcacggtcgggcagtcgattctcgagccactcgtgtcgttc
ggcgtgggggatcgggcatcccgctcggcccgcctgcgcgaactgctcgatcaggtcgca
ttgccgactgccttcgccgaccgccgccccgccgagctctcgggcgggcagcgccagcga
gtcgccattgcgcgggcacttgcgctgaagcccgacctggtgtttctcgacgagccggtg
tcggcgctcgacgtgtcggtgcaagagcagattctgacgctgctggccacgctgcaagac
gagctcgggctcagctacctgttcatttcgcatgacctcgcggtcgtagcccagctggcc
catcgggtcgccgtgctcaaccgcggggtgctggtggagcagggtgccaccatcgacgtg
ttcgcgaacccgcagagcgactacacgaaggcgctgctcgacgcgattcccgggcggtcg
acggccgtagcgccggcgagggacggtgtcgccgcggccacgtctcgcgccgtttcttcc
ggcacagcgtcggtcgccgcggccacgtcttccgcggcttcttccggcgtggcgtcgggc
accgcgtcggcacctaccgattcacgtgaggaggtcccatcatga
DBGET
integrated database retrieval system
