Subtercola endophyticus: LQ955_15355
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Entry
LQ955_15355 CDS
T08409
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suba03032
]
LQ955_15355 (gyrA)
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_15355 (gyrA)
Enzymes [BR:
suba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQ955_15355 (gyrA)
DNA replication proteins [BR:
suba03032
]
Prokaryotic type
DNA Topoisomerases
LQ955_15355 (gyrA)
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQ955_15355 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DacZ_P
VPS11_N
Peptidase_S55
Motif
Other DBs
NCBI-ProteinID:
UFS58373
LinkDB
All DBs
Position
3302998..3305556
Genome browser
AA seq
852 aa
AA seq
DB search
MTDETPTGDQQAPDSSGAITDRIEQVDLQLEMQRSYLDYAMSVIVGRALPDVRDGLKPVH
RRVIYAMYDGGYRPDRAFSKSARVVGEVMGQFHPHGDTSIYDALVRLIQPWSLRYPLALG
QGNFGSAGNDGAAAPRYTETKMAPLALEMVRDIQEETVDFQDNYDGRTLEPVVLPARFPN
LLVNGSVGIAVGMATNIPPHNLREVAAGAIWYLENPDATREELQDALIQRIKGPDFPTGA
QILGVKGIHDAYRTGRGSITMRAVVSVEELQGRTCLVVTELPYQVNPDNLAIKIAELVKD
GKVAGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTSLQENFGANMLAIVDGIP
RTLPIDGFISEWVAHQIDVIVRRTQFRLREAEERMHILRGYLKALDALDEVIALIRRSDT
VDDARTGLMALLEIDEIQSDAILTMQLRRLAALERQKIHDEADALQVKIDEFHVILGSPA
RQREIIVEELTEIATKFGDDRRTEIMFGFDGDMNVEDLIPEEEMVVTVTRGGYIKRTRSD
NYRSQHRGGKGVKGAQLRADDVVEHFFVTTTHHWLLFFTNKGRVYRAKAYELQEAGRDAK
GQHVANLLALAPDEQIAQILDIRDYKAATYLVLATREGLLKKTALSEYDTNRSGGIIAIN
LREDDELVSALLVEEDSDVLLVSKLGMSIRFTASNESLRPMGRSTAGVIGMKFREDDYLL
DASVVSEAGFVFVVTEGGYAKRTSVDQYRVQGRGGLGIKVAKLQEERGELAGSLIVDEDD
EVLVVLASGKVVRSAVAEVPAKGRDTMGVVFARFADEDRIIALAKNTERTVVSEDSAEVE
PSEDAGEETIDE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaaacccccaccggcgaccagcaggcacccgactcgagcggcgccatcacc
gaccgcatcgagcaggtcgacctgcagctcgagatgcagcgctcgtacctcgactacgcg
atgagtgtgatcgtggggcgcgcgcttccggatgttcgtgacggcctgaagccagtgcac
cgtcgtgtgatctacgcgatgtacgacggcggttaccggcccgaccgggccttttcgaag
tcggctcgtgtcgtcggcgaggtcatggggcagttccacccgcacggtgacacctcgatc
tacgatgcactggtgcgcctcatccagccgtggagcctgcgctacccgctcgctctcggc
cagggcaacttcggttctgccggcaacgatggcgcagccgcgccgcgatacaccgagacc
aagatggctcccctcgcgctcgagatggtgcgtgacattcaagaagagaccgtcgacttt
caagacaactacgacggccgcacgctcgagcctgtcgtgctgccggcccgctttccgaac
ctgctggtcaacgggtcggtgggtatcgcggtgggcatggccacgaacatcccgccgcac
aacctgcgtgaggtcgcagccggcgccatctggtacctcgaaaaccccgacgccacgcgc
gaagagctgcaagacgcgctgatccagcgcatcaagggccccgattttccgaccggtgcc
caaatacttggggtcaagggcatccacgatgcctatcgcacgggtcgcgggtcgatcacg
atgcgcgctgtcgtcagtgtcgaagagctacaggggcgcacctgcctcgtggtgaccgag
ctgccgtaccaggtgaaccccgacaatttggcgatcaagatcgccgaattggtgaaagac
ggcaaggtcgccggtatcgccgacattcgcgacgagacgtcaggtcgaacgggtcagcga
ctcgtcatcgtgctcaagcgcgacgccgtggccaaggtggtgctgaacaacctctacaag
cacacctcgttgcaagagaacttcggcgcgaacatgctggcgatcgtcgacggcattccg
cgtacgctgccgatcgacggtttcatctccgagtgggtcgctcaccagatcgacgtcatc
gttcggcgcacccagtttcggctgcgtgaggccgaagagcgcatgcacatcttgcgcggg
tatctcaaggcactggatgctctcgatgaggtcatcgcgctcatccgtcgttcagacacc
gtcgacgacgcccgaacgggcctcatggcgctgctcgagatcgacgagatccagtcggat
gcgattcttaccatgcagctgcgccgtcttgcggcgctcgagcgccagaagatccacgac
gaagctgatgcactgcaggtcaagatcgacgagttccacgtgattctgggcagcccggcg
cgtcagcgcgagattatcgtcgaagagctcaccgagatcgccacgaagttcggtgacgac
cggcgcaccgagatcatgttcgggttcgacggcgatatgaacgtcgaagacctcatcccg
gaagaagagatggtggtgacggtcacgcgcggcggctacatcaagcgcacgcgtagcgac
aactaccgcagtcagcaccgcggtggtaagggcgtcaagggcgcccagctgcgcgcagac
gacgtcgtcgaacacttcttcgtgacgaccacgcatcattggctgctgttcttcacgaac
aaggggcgcgtctaccgcgccaaggcgtacgagctgcaagaggcgggtcgcgatgcgaag
ggccagcatgttgcaaacctgcttgcgctcgcgcccgacgagcagatcgcgcagattctc
gacattcgcgactacaaggcggcgacctacttggtgctcgccactcgcgaggggttgctg
aagaagacggcgctgagcgagtacgacacgaatcgctcgggtggcatcatcgcgatcaac
ctgcgtgaagacgatgagctcgtctctgcgctgctggtcgaagaagattcggatgttctg
ctcgtctccaagctgggcatgtcgattcgcttcaccgcgtcgaacgagtcgttgcgcccg
atgggccggtcgacggcgggcgtgatcggcatgaagttccgcgaagacgattacctgctc
gacgcttcggtcgtgtcagaggccggtttcgtgttcgtggtgaccgaaggcgggtacgcc
aagcgcacgtcagtcgaccaataccgcgttcagggccgtggtggtctcggcatcaaggtg
gcgaaactgcaggaggagcgcggcgagctcgccggctcgctcatcgtcgacgaggacgac
gaggtcttggtggttcttgccagcggcaaggtggtacgctctgccgtggccgaagtcccg
gctaaaggccgagacaccatgggtgttgtctttgcacgatttgccgatgaagatcgcatt
atcgcgctggccaaaaacaccgaacgcaccgtagtttcggaagactctgccgaggtagag
ccctcggaagatgccggagaggaaaccatcgatgagtaa
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