Subtercola endophyticus: LQ955_16070
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Entry
LQ955_16070 CDS
T08409
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suba03032
]
LQ955_16070
03036 Chromosome and associated proteins [BR:
suba03036
]
LQ955_16070
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_16070
DNA replication proteins [BR:
suba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LQ955_16070
Chromosome and associated proteins [BR:
suba03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LQ955_16070
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LQ955_16070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UFS58499
LinkDB
All DBs
Position
3457023..3457310
Genome browser
AA seq
95 aa
AA seq
DB search
MADKSLNKTELVAAVAAASGQTQTAVNEVLDSLFTTLADSVSNGVKVTIPGWLAVERTSR
AARTGRNPQTGEAIQIAAGNSVKISAGSKLKAAVK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagtcactcaacaagaccgagctcgtcgctgccgtcgccgccgcgtctggc
cagacccagaccgctgtcaacgaggtgctcgactccttgttcaccactctcgccgactcg
gtgtcgaacggcgtgaaggtcaccatcccgggctggctcgccgtcgagcgcacctcgcgt
gccgctcgcaccggtcgcaacccgcaaaccggcgaggccattcagatcgccgccggcaac
tcggtgaagatcagcgcaggcagcaagctcaaggctgccgtcaagtag
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integrated database retrieval system
