Subtercola endophyticus: LQ955_16400
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Entry
LQ955_16400 CDS
T08409
Name
(GenBank) type II toxin-antitoxin system HipA family toxin
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HipA_C
Couple_hipA
Motif
Other DBs
NCBI-ProteinID:
UFS58562
LinkDB
All DBs
Position
complement(3522047..3523453)
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AA seq
468 aa
AA seq
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MARSVTQLTAYLHGFRVGWFRQTDGAISFEFDDEWREASGRLQLSESLPKSRKVHTGTAP
ENFLWGLLPDNSAVLVRWGEMFGANPRNALSLLRHVGLDTAGAVQLSEVDETVLDAAGGS
DPLDDRVIAAHLRAMHGDPLAWLVPSLHDGNFSLAGAQAKFALLRDADGWRLPWGGEPTT
HIVKPGVAGFSHQDVDEHLCLVAATQLGLNAAKSEIHDFGGESAIVIERYDRDFADGHIN
RIHQEDVLQAAGIHPALKYQNEGGPGITTTADLIRRAVNRSSRDDALRRFFDANIFNWII
SGTDAHAKNYSLLHTARGTTLAPLYDVASSLPYDDLPARKVKLAMSMAGRYRVHEIEPRH
ILREATGISLDTDVVRERMIELCESVADAFSAAASASRLKRDDRDFAARLTDSVARRSAE
LLPKIHATTSRSLAAHLRPEARAITQPRRKNVGLSGNGGRFASKQPSN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtctgtcacacaactcaccgcgtatctgcacggctttcgtgtgggttggttt
cgccaaacagacggcgcaatcagtttcgaattcgacgatgagtggcgcgaagcgagcggg
cgtctccaactttcagaatcactccccaagtcgcgaaaggtgcacacaggcaccgccccc
gagaattttctgtggggcctgctgcccgacaacagcgcggtactggttcgttggggcgag
atgttcggggcgaatccgcgcaacgcgctttcgctgctgcgccacgtcgggctcgacacc
gccggtgccgtacagctttcagaagtcgacgaaacggttctcgacgcggctggcggctca
gacccgctcgatgaccgcgtcatcgcggctcatcttcgcgctatgcacggcgatccactc
gcgtggcttgtgccgtcgcttcacgacggcaacttcagcctggccggagcgcaagcgaag
ttcgccctgctccgagacgccgacggctggcgactgccctggggcggtgaacccacgaca
catatcgtgaagccgggcgtggcgggattctcccaccaagacgtggacgagcacctctgt
ctagtggcggccacacaactcggcctgaacgccgcaaagtctgagatacacgatttcggc
ggcgagagtgcgatcgtgatcgaacgatatgaccgcgatttcgcagatgggcacatcaat
cgtattcatcaggaagacgtcttgcaggcggcgggaatccaccctgccctgaagtaccag
aacgagggcggaccaggcattacaacaaccgcagaccttattcgacgtgctgtgaaccgc
agcagccgcgatgacgccctccgcagattcttcgatgcgaacattttcaactggatcatc
tctggcaccgatgcacacgcaaagaactactcgctcctgcacaccgcgcggggcacgacc
ctcgcgccgctctacgacgtcgcgagttcactcccctacgacgacctgcccgcccgaaag
gtgaagctcgctatgtcgatggcggggcgctatcgcgtgcatgagatcgagccgcgacac
attcttcgcgaagcgacgggcatctcgctcgatacagacgtcgttcgcgaacgaatgatc
gagctctgcgaaagcgttgccgacgctttctccgccgcagcctcggcatctcgtctcaaa
cgtgatgatcgtgacttcgcggcccggctgactgactcagtcgcacgccgaagtgccgag
ctgttaccgaagatccacgcgaccacctcgcgttcgctcgccgcgcatcttcggccggag
gcacgggcgataacgcagccgcggcgtaagaacgtcggtctcagcggcaacgggggccgc
ttcgcctcgaagcagccgagcaactga
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integrated database retrieval system
