Subtercola endophyticus: LQ955_17680
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Entry
LQ955_17680 CDS
T08409
Name
(GenBank) AMP-binding protein
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
suba
Subtercola endophyticus
Pathway
suba00010
Glycolysis / Gluconeogenesis
suba00620
Pyruvate metabolism
suba00630
Glyoxylate and dicarboxylate metabolism
suba00640
Propanoate metabolism
suba00680
Methane metabolism
suba00720
Other carbon fixation pathways
suba01100
Metabolic pathways
suba01110
Biosynthesis of secondary metabolites
suba01120
Microbial metabolism in diverse environments
suba01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LQ955_17680
00620 Pyruvate metabolism
LQ955_17680
00630 Glyoxylate and dicarboxylate metabolism
LQ955_17680
00640 Propanoate metabolism
LQ955_17680
09102 Energy metabolism
00720 Other carbon fixation pathways
LQ955_17680
00680 Methane metabolism
LQ955_17680
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
suba01004
]
LQ955_17680
Enzymes [BR:
suba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
LQ955_17680
Lipid biosynthesis proteins [BR:
suba01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
LQ955_17680
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Ortholog
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Motif
Pfam:
AMP-binding
AMP-binding_C
PsiB
Motif
Other DBs
NCBI-ProteinID:
UFS58802
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All DBs
Position
complement(3818883..3820619)
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AA seq
578 aa
AA seq
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MNATETFRAARNTLLEHRTAAAAATAAFEWPDVGPHFNWAIDWFDAIAVGNERLALHIVE
EDGSETKVSYDQLRWRSDEVAAWLDSVGVQQGDHVMLMLGNRVELWESMLAIMKLGAVIL
PTTTLLSPADLDDRLVRGGVSHVIADVSVIDRFTGVEGDFERIVVGANDGRPSVSVGRPG
AGDGTRKTALPDGWLDYDDSLEGLGIAPSVTVDTSDPSLIYFTSGTTSKPKMVVHTQASY
PVGHLSTLYWLGIGPNDVHLAISSPGWGKHAWSCFFAPFNAEATVFIYNYGRFDPVALRE
RLDQHRVTTFCAPPTVWRMLIQSDLGTKPRALHEALSAGEPLNPGVIAAVEEAWGLTIRD
GYGQTETTALIANPPGGEVVPGAMGRALPGVAIAIVDPLTGAPAATGEICLDLSVEPANL
MSGYLNDDERTAASRAGGYFHTGDVAVLADDGTITFVGRTDDIFKSSDFKISPFEVESVL
LQHPAVAESAVVPAPDATRHSVVKAYVALAEGWAPDAATAEVIFAHSHAQLSSFERVRRI
EFFELPKTISGKIRRVELREREQAAFDRGEAISTEWRH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaccgagaccttccgggccgcccgaaataccctgctcgagcaccgcactgct
gcggcagccgccactgcggccttcgagtggccagacgtcgggccgcacttcaactgggct
atcgactggttcgatgccatcgccgtcggcaacgaacgcctcgccctgcacatcgtcgaa
gaagacggcagcgagacgaaggtcagctatgaccagttgcgctggcgcagcgacgaggtc
gcagcgtggctcgacagcgtcggggtgcagcagggtgaccacgtgatgctgatgctcggc
aaccgggtcgagctgtgggagtcgatgctggccatcatgaagctgggagcggtcatcctg
ccgaccaccaccctgctctcgccggccgatctcgacgaccgactggtgcgcgggggtgtg
agccacgtgatcgccgacgtctcggtgatcgaccgattcacgggcgtcgagggcgacttc
gagcgcatcgtcgtcggagcgaacgacggccgtccgagcgtcagcgtcggccgtccgggc
gccggcgacggcactcgcaagaccgcactccccgacggctggctcgactacgacgactcg
ctcgagggcctcggcatcgcgccttcggtcaccgtcgatacctccgacccgagcctcatc
tacttcacctcgggcaccacctcgaagcccaaaatggtcgtgcacacccaggcctcctac
cccgtcggccacctttcgaccctgtattggctgggcatcggcccgaatgatgtgcacctc
gccatcagttcgccgggctggggaaaacacgcctggagctgctttttcgcaccgttcaac
gccgaggcgacggtgttcatctacaactacggccgcttcgatccggtcgccctgcgtgag
cgactcgaccagcaccgggtgacgaccttctgcgcgccgcccacggtgtggcggatgctc
atccagagtgatctcggcacaaaaccgcgggcactgcacgaggccctctcggccggcgag
ccgctgaaccccggcgtcatcgccgccgtcgaagaggcgtgggggctgaccatccgcgac
ggctacggacagaccgagaccaccgcgctcatcgccaacccgcccggcggcgaggtcgtg
ccgggtgccatgggccgggcgcttcccggcgtcgccatcgcgatcgtcgacccgctcacc
ggggcgcctgccgcgacgggcgagatctgcctcgatctcagcgtcgagcccgcgaatctc
atgtcgggctacctgaacgacgacgaacgaacggccgcctcgcgggcaggcgggtacttt
cacaccggcgacgtcgcggtgctcgccgacgacggcacgatcacgttcgtcggccgcacc
gacgacatcttcaagtcgtccgacttcaagatctcacccttcgaggtcgagagtgtgctg
ctgcagcatcccgccgttgcagagtctgccgtcgtgccggctccggatgcgacgcggcac
agcgtcgtgaaggcctacgtcgcccttgccgagggctgggcgcccgacgctgcgacggcc
gaggtcatcttcgcgcactcgcacgcccagctctcgtcgttcgagcgggtacgccgcatc
gagttcttcgagctgccgaaaaccatctcgggcaagatccgccgggtggagttgcgcgag
cgcgagcaagcggccttcgaccgcggcgaagcgatcagcacggagtggcggcactga
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