Subtercola endophyticus: LQ955_18575
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Entry
LQ955_18575 CDS
T08409
Name
(GenBank) DEAD/DEAH box helicase
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
UFS58970
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All DBs
Position
4003311..4005746
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AA seq
811 aa
AA seq
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MSEYSKKPANGGNKFTGAKGSSSAAAGSRSAGHRGYKPAEAGAPKKARWNADERAERGSA
PTNRGQRPNWEPRAATPTRESNYSNRGERPAYGDRNDRGASTGRPSYGDRGASTGRPSYG
DRNDRGASTGRPSYGDRNASSDRGGRGERPSYGDRNDRGASTGRPSYGDRNDRGASTGRP
SYGDRNASSERGGRGERPSYGDRNDRGASTGRPSYGDRNASSERPSYGDRPARTERPSYG
DRGASTGRPAYGDRNASSERPSYGDRPARTERPSYGDRGASTGRPAYGDRTERPSYGDRP
ARTERPSYSDRPERTERPSYGDRPARAERTERPSYGDRGASAGRSERPSYSDRPARSFDD
RRDSNTDRAARGSDFYPKRDSNGYAAAGAVASGAAAGRFGAQDDVVLERLEAEVTTASDV
VDKTFGDLGLGDNITRQLAGMGAPTPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAP
LVERLMENDGAKGRKPGRLPRALILAPTRELAMQIDRTVQPIARSVGLFTTPIFGGVPQY
KQVSALQRGTDIIIATPGRLEDLVEQGRLDLSQVKIVVLDEADHMCDLGFLEPVQRILRL
TAPKSQKLLFSATLDKGVAQLVNEFLVEPAVHEVAGEDQASSTIDHRVLLIEQRDKRAII
EQLASGEGKTLIFARTRAFAEELAENLDNAGIPATSLHGDLNQSRRTRNLQLLTSGRVNV
LVATDVAARGIHVDDINLVIQADAPDEYKTYLHRSGRTGRAGKQGTVVTLISKSRRRRMD
ELLERADIEAVMEPAAPGDRLIDSLQSVGAV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatactcgaagaagcccgccaacggcggcaataagttcacgggagccaaaggc
tcctcttctgcagcggccggctcgcgcagcgcaggtcaccgcggctacaagcccgccgag
gccggtgcacccaagaaggctcgctggaacgccgacgagcgtgccgagcgcggctctgcg
cccacgaaccgcggccagcgccccaactgggagccgcgcgcggcgaccccgacgcgggag
agcaactacagcaaccgcggcgagcgccccgcttacggcgaccgcaacgaccgtggcgcc
tcgacgggtcgtccgtcgtacggcgatcgtggcgcatccactgggcgcccctcgtatggt
gaccgcaatgaccgtggtgcgtcgaccggccgcccttcgtacggtgaccgcaacgcgtcg
agcgatcgcggtgggcgcggcgagcgcccctcgtatggtgaccgtaacgaccgtggtgcg
tcgactggtcgtccctcgtacggtgaccgcaacgaccgtggcgcctcgacgggccgtccc
tcgtacggtgaccgcaacgcgtcgagcgagcgcggtggccgcggcgagcgtccttcgtat
ggtgaccgtaacgaccgtggtgcgtcgacgggccgtccctcgtacggcgaccgcaacgcg
tcgagcgagcgtccgtcgtacggcgatcgccccgctcgcacggagcgtccgagctacggc
gaccgcggtgcatccacgggccgcccggcttacggtgaccgcaacgcgtcgagcgagcgc
ccctcctacggcgatcgccctgctcgcacggagcgtccgagctacggcgaccgcggtgca
tccacgggccgcccggcctacggtgaccgcaccgagcgtccgtcgtacggtgaccgcccg
gcccgcaccgagcgtccgtcgtactccgaccggcctgagcgcacggagcgtccctcctac
ggtgaccgcccggctcgcgccgagcgtaccgagcgcccctcgtacggcgaccgcggagca
tccgccggccgcagcgagcgccccagctacagcgaccgccccgcgcgttcgttcgacgac
cgtcgcgactcgaacaccgaccgtgccgctcgtggcagcgacttctacccgaagcgcgac
agcaacggctacgcagcggctggagccgtggcatccggtgccgccgccggccggttcggt
gcacaagacgacgtcgtgctcgagcgtctcgaagccgaagtgaccaccgcgtctgacgtg
gtcgacaagaccttcggcgacctgggcctcggcgacaacatcacccgccagctggccgga
atgggtgcgcctacgccgttcccgattcaggcagcgaccattcccgacgttctcgccggt
aaagatgttctcggccgcggcaagaccggatcgggcaagaccatcgccttcggcgccccg
ctcgtcgagcgcctcatggagaacgacggagccaagggccgcaagcccggtcgcctgccg
cgcgcgctcattctggccccgacccgtgagctcgcgatgcagatcgaccgcaccgtgcaa
cccatcgcccgttcggtcggcctgttcaccacgccgatcttcggcggggttccgcagtac
aagcaggtctcggcgctgcagcgcggtaccgacatcatcatcgccacccccggccgcctc
gaagacctcgtggagcagggtcgtctcgacctctcgcaggtcaagatcgtcgttctcgac
gaggccgaccacatgtgcgacctcggcttcttggagccggtgcagcgcatccttcgtctg
accgcccctaagagccagaaactgctcttctcggccaccctcgacaagggtgtcgcccag
ctcgtcaacgagtttctcgtcgagccggccgtgcacgaagtcgccggcgaagaccaggcg
tcgtcgaccatcgaccaccgcgtgctgctcatcgagcagcgcgacaagcgcgccatcatc
gagcagctcgcctcgggcgagggcaagacgctgatcttcgcccgcacccgtgcgttcgcc
gaagagctcgccgagaacctcgacaacgccggaatcccggccacgtcgctgcacggtgac
ctcaaccagtcgcgccgcacgcgcaacctgcagctgctcaccagcggccgggtcaacgtg
ctcgtggcgacggatgttgcagcccgcggcatccacgtggacgacatcaacctggtcatc
caggccgatgcgcccgacgagtacaagacctacctgcaccgctcgggccgtacgggtcgc
gccggcaagcagggcacggtcgtcacgctgatctccaagtcgcgtcgccgtcgcatggac
gagctgctcgagcgcgccgacatcgaggccgtcatggagcccgccgcccccggcgaccgg
ctcatcgattcgctgcagagcgtgggcgctgtataa
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