Subtercola endophyticus: LQ955_18590
Help
Entry
LQ955_18590 CDS
T08409
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suba
Subtercola endophyticus
Pathway
suba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQ955_18590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suba03019
]
LQ955_18590 (recQ)
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_18590 (recQ)
Enzymes [BR:
suba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQ955_18590 (recQ)
Messenger RNA biogenesis [BR:
suba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LQ955_18590 (recQ)
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQ955_18590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
UFS58973
LinkDB
All DBs
Position
4007865..4009814
Genome browser
AA seq
649 aa
AA seq
DB search
MTLNLQAGVPAAASPVEAAEALRGAAAGVSDPGDAALGAEARAVLKRVFGYDDFRGDQAA
VIEQVSAGGDAVVLMPTGGGKSLCYQIPSLLREGTGVVVSPLIALMQDQVDALLAVGVRA
AFLNSTQDSFERTRVENAYLAGELDLLYVAPERLASESTKRFLENGTIALFAIDEAHCVS
QWGHDFRPDYLGLSELADRWPEVPRIALTATATDATHKEITERLKLGRAQHFVASFDRPN
IQYRIENKGEVRRQLLSLIRSEHDGDAGIVYALSRKTVEQTAQFLAANGVNALPYHAGLD
AGLRARTQSRFLREDGVVIVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDG
MPSTAWLAYGLQDVVQQRRMIEQSPGDLSHRRKLSSHLDAMLALCETVDCRRVNLLGYFG
QQSVPCGNCDTCLQPPQSWDGTVAAQKLLSTVVRLQRERNQKFGAGHLIDILRANKTPRV
DQYGHDELTVWGVGSDLSEQQWRGVVRQLLAKGLLAVNDDGFGTLVLSPTSADVLSGALT
VSMRTESERASGAGGAGGGGGSRAARAKAAVADLPDDAIPLFEALRVWRGATAKVMGVPA
YVIFHDATLREIASRRPASLADLEGLSGMGQKKLDTYGEEVLAVVAATP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgactttgaacctgcaggccggcgtgccagcggccgcatcgcccgtcgaggccgccgag
gccctgcgcggcgccgcggccggcgtctccgacccgggtgacgccgccctgggcgcagag
gcgcgcgcggtactcaagcgtgtgttcgggtacgacgacttccgcggcgatcaggcggcg
gtcatcgaacaggtctcggccggcggtgacgcggtcgtgctcatgccgaccggcggcggc
aaatcgctgtgttaccagattccttcgctgctgcgcgagggcaccggcgtcgtcgtctca
ccgctcatcgcgctcatgcaagaccaagtggatgccctgctggccgtcggcgtacgagcg
gccttcctcaactccacccaagactccttcgaacgaacccgggtcgagaacgcctatctc
gccggcgagctcgatctgctctacgtcgcaccggaacgcctcgcctccgagtcgaccaaa
cgctttctcgagaacggcaccatcgcgctcttcgccatcgatgaggcgcactgcgtctct
cagtgggggcacgacttcaggcccgattacctcgggctgtcagagctggccgatcgctgg
ccagaggttccgcgcatcgcgctcaccgccacggcgaccgatgcgacgcataaagagatc
acggagcggctgaagctcggccgcgcgcaacacttcgtggcgagcttcgaccgcccgaac
atccagtaccgcattgagaacaagggtgaggtcaggcggcagctgctgtcgttgatccgc
agcgagcacgacggcgacgcgggcatcgtctacgcactttcgcgcaagacggtcgagcag
accgcgcagtttcttgcggcgaacggcgtgaacgcgctgccctatcacgccggactcgac
gccggcctgcgcgcccgaacgcagtcacggttcctgcgcgaagacggcgtggtcatcgtc
gccaccatcgcgttcggtatgggcatcgacaagcccgatgtgcggttcgtcgcgcacatc
gacctgccgaaatcggtcgagggctactaccaagagaccggtcgcgccggtcgtgacggc
atgccgtcgacggcctggctcgcctatggcctgcaagacgtggtgcagcagcggcgcatg
atcgagcaatcgcccggtgatctgtcacaccgccgaaagctgtcttcgcacctcgacgcg
atgctcgcgctgtgcgaaaccgtcgactgccgacgggtgaacctgctcggctacttcggt
cagcagagtgtgccctgcggcaactgcgacacctgcctgcagccgccgcagtcgtgggac
ggcacggtcgccgcccagaagctgctctcgacggtggtgcggctgcagcgcgagcgaaac
cagaagttcggcgcgggccatctcatcgacatcttgcgcgcgaacaagacgccgcgcgtc
gatcagtacgggcacgacgagctcacggtctggggcgtcggctccgatctcagtgaacag
cagtggcgcggggtcgtgcggcagttgctcgcgaaggggctgttggctgtgaacgacgac
gggttcggcacgttggtgctgtctccgacgagtgccgatgtgctcagcggcgcgctgacg
gtgtcgatgcgcaccgagtccgaacgggcatccggtgccggcggggcgggcggcgggggc
ggttcgcgggcggcgcgggcgaaggccgccgttgcagacctgcccgacgacgcgattccg
ctgttcgaagcgttgcgagtctggcgcggagccaccgcgaaagtgatgggcgtgcccgcc
tacgtcatctttcacgacgcgacgctgcgcgagatcgcgtcgcgacgcccggcttcgctg
gccgacctcgagggcctgagcggaatgggtcagaagaagctcgacacctacggcgaagag
gttctggcggtcgttgcagcgacgccgtag
DBGET
integrated database retrieval system
