Subtercola endophyticus: LQ955_19020
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Entry
LQ955_19020 CDS
T08409
Name
(GenBank) FAD-binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
suba
Subtercola endophyticus
Pathway
suba00020
Citrate cycle (TCA cycle)
suba00190
Oxidative phosphorylation
suba00650
Butanoate metabolism
suba00720
Other carbon fixation pathways
suba01100
Metabolic pathways
suba01110
Biosynthesis of secondary metabolites
suba01120
Microbial metabolism in diverse environments
suba01200
Carbon metabolism
Module
suba_M00009
Citrate cycle (TCA cycle, Krebs cycle)
suba_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
suba_M00149
Succinate dehydrogenase, prokaryotes
suba_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LQ955_19020
00650 Butanoate metabolism
LQ955_19020
09102 Energy metabolism
00190 Oxidative phosphorylation
LQ955_19020
00720 Other carbon fixation pathways
LQ955_19020
Enzymes [BR:
suba01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LQ955_19020
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
FAD_binding_3
HI0933_like
Pyr_redox_2
Pyr_redox_3
Thi4
GIDA
NAD_binding_8
ApbA
Motif
Other DBs
NCBI-ProteinID:
UFS59050
LinkDB
All DBs
Position
complement(4100513..4102249)
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AA seq
578 aa
AA seq
DB search
MTTSERQISTTVLVIGTGGSGLRAAIELAEAGVDVLALGKRPKSDAHTSLAAGGINAALA
TMDADDSWQQHAADTLKESYLLANPHTVEIVTSGAARGIEDLERYGMPFAREADGRISQR
FFGAHTYRRTAFAGDYTGLEIQRTLINRAAQLHVPILDTVYVTRILVNDDGAVFGAYGFD
LEDGTRYLIHADAVILAAGGHNRIWRRTSSRRDENTGDSFRLAVEAGGRLRDPELVQFHP
SGIIEPENAAGTLISEAARGEGGILRNGLGERFMQNYDPERLELSTRDRVALACYTEIKE
GRGTPNGGVWLDVSHLPRETIMTRLPRVYQTMLELQMLDITQDPIEIAPTAHYSMGGVWV
RPEDHSTDVPGLYAIGEASSGLHGANRLGGNSLIELLVFGRIVGQAAAAYSAGLPAQARS
AAAVSTARGEIAELLAADGPENVRALQRAIRNTMTEHAGVVRDEQGLRAGLAELDAIEAR
IAGVGIHPDIAGYQDLAHAFDLKSAALAARATLEAALERRETRGCHNRSDYPELDPALQV
NLVWSPAGGVVREPIPAIPAEIAALMREEVSVAGKLVE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcagaacgccaaatctccaccacggttctcgtcatcggcacgggcggatcg
ggcctgcgcgccgccatcgagctcgccgaagccggggtcgatgtgctcgccctcggcaag
cgccccaagagcgacgcccacacctccctcgcggccggcggcatcaacgccgcgctcgcc
acgatggacgccgacgacagctggcagcagcacgccgccgacacgctgaaagagagctac
ctgctcgccaacccgcacaccgtcgagatcgtgacctccggcgctgcccgcggcatcgaa
gatctcgagcgctacggcatgccgttcgcgcgcgaagccgacggccgcatctcgcagcgt
ttcttcggcgcgcacacctaccggcgcacggccttcgcgggcgattacacgggcctcgag
attcagcgcacactgatcaaccgggccgcacaactgcatgttcccattctcgacacggtg
tacgtgacgcgcattctggtcaacgacgacggggcggtgttcggggcatacggcttcgac
ctcgaagacggcacgcggtatctgattcacgccgacgcggtcatcctggccgccggcggg
cacaaccgcatctggcggcgcacgtcgtcgcggcgcgacgagaacacgggcgactcgttc
cggctggcggtcgaggcgggcgggcggctgcgcgaccccgagctggtgcagtttcacccg
tcgggcatcatcgagcccgagaacgcggccggcacgctcatctccgaggcggcccgcggc
gagggcggaatcttgcgcaacgggctcggcgagcggttcatgcagaactacgaccccgag
cggctcgagctgtcgacccgtgaccgggtggcgctggcctgttacaccgagatcaaagag
gggcgcggtacgccgaacggcggggtatggctggatgtctcgcacctgccccgcgagacc
atcatgacccggctgccgcgcgtctaccagacgatgctcgagctgcaaatgctcgacatc
acgcaagaccccatcgagatcgcgcccaccgcgcactactcgatgggcggggtctgggtt
cggccagaggatcactcgaccgacgtacccgggttgtacgccatcggcgaagcgtcgtcg
gggctgcacggggcgaaccggctcggcggcaactcgctgatcgagctgctggtgttcggg
cgcatcgtggggcaggccgcggccgcgtattcggccgggctgccggcgcaggcgcgttcg
gccgccgccgtatcgaccgcacgaggcgagatcgccgagctgctcgcggccgacggaccc
gagaacgtgcgcgccctgcagcgcgccattcgtaacacgatgaccgagcacgcgggcgtg
gtgcgcgacgagcaggggctgcgggccggcctcgccgagctcgacgccatcgaagcgcgc
atcgccggcgtgggcatccaccccgacatcgcgggctaccaagacctcgcccacgcgttc
gacctcaagtcggccgccctggcggctcgggccactctggaggcggcactcgaacgccgc
gagactcggggctgccacaaccgcagcgactaccccgagctcgacccggcgctgcaggtg
aatctcgtgtggtcgccggccggtggtgtcgtgcgcgagccgatcccggcgatccccgcc
gagatcgcggccctcatgcgcgaagaggtgtcggtggcgggcaagctcgtggagtag
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