Subtercola endophyticus: LQ955_19465
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Entry
LQ955_19465 CDS
T08409
Name
(GenBank) GNAT family N-acetyltransferase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LQ955_19465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suba03019
]
LQ955_19465
03009 Ribosome biogenesis [BR:
suba03009
]
LQ955_19465
04131 Membrane trafficking [BR:
suba04131
]
LQ955_19465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
suba04147
]
LQ955_19465
Messenger RNA biogenesis [BR:
suba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LQ955_19465
Ribosome biogenesis [BR:
suba03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LQ955_19465
Membrane trafficking [BR:
suba04131
]
SNARE
SNARE associated proteins
Others
LQ955_19465
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LQ955_19465
Exosome [BR:
suba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LQ955_19465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
AAA_lid_3
Acetyltransf_7
AAA_16
Acetyltransf_10
AAA_5
AAA_22
AAA_28
RuvB_N
Acetyltransf_9
AAA_2
AAA_14
FR47
AAA_18
AAA_33
NACHT
RNA_helicase
nSTAND3
SKI
TsaE
AAA_19
ATPase_2
AAA_24
bpMoxR
AAA_17
ABC_tran
AAA_11
AAA_30
Mg_chelatase
IstB_IS21
Sigma54_activat
Cytidylate_kin
AAA_25
KTI12
TIP49
IDM1_C
NTPase_1
NPHP3_N
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UFS59123
LinkDB
All DBs
Position
complement(4200862..4202157)
Genome browser
AA seq
431 aa
AA seq
DB search
MAHFRIRDFHPDDIDSILHLWEEMRSSQTEPVYSLPEVLASCQQDHAVVAVIDDVVIGAA
VGRAAHNQGWIVFLSTAPQHQRQGVGGRLLAALEKRMAPLGLSKLSVLLPDSTVPVDAFS
EQGFETKQNLRYLERRIPVQRNELNALTELGGRILPRGLWESIGGMQKEKELLERRLVMP
LANSDLADQFGVVPPSAVVLFGPPGTGKTTFARAIASRLEWSFVEVFPSRLAADPAGLAG
ALRETFAKIADLEHAVVFIDEVEEIAVQRGGEPPSAMQGVTNELLKIIPTFRDQPNRLLV
CATNFIRSLDSAFLRHGRFDYVIPIGLPDPAARESIWARYIPAQSLGEVDLSALVERTEG
FSPADIEYAARKASQSALEKALFSPVSPDGSAPASGPRTEDYLEAINSTRATVSAEVAQA
FLEDIEGIARL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtggcccactttcgcattcgagattttcatcccgatgacatcgatagcattctgcacctc
tgggaagagatgcggtcgtcgcagaccgagccggtctacagtcttcccgaggtgctggcg
tcgtgccagcaggatcacgccgtcgtcgccgtgatcgacgatgtcgtcatcggcgcagcc
gtcggccgagcggctcacaatcagggctggatcgtgttcttgtcgaccgcaccgcaacac
cagcgccagggggtcggaggcagattgcttgctgcgctcgagaaacgcatggcgcccctc
gggctctcgaagctctctgttctgttgcccgacagcacggtacccgtcgacgcgttcagc
gagcagggcttcgagacgaaacagaacctccgctatctcgaacggcgcattccggtgcag
cgcaacgaattgaacgccctcaccgaattgggtgggcgcattctgccgcgaggcctgtgg
gagtcgatcgggggcatgcagaaagagaaagaactgctcgagcgccgactcgtgatgccg
ctcgcgaacagcgatctggccgaccagttcggcgtcgttccgcccagcgcggtggtgttg
ttcgggccgcccggaaccggaaagaccacgttcgcccgagcgattgcgtcacgactcgag
tggtcgttcgtcgaggtgtttccgtcgcgccttgctgccgatccagccggcctggccggg
gccctgcgcgaaacgttcgcgaagatcgccgacctcgaacacgctgtggtgttcatcgac
gaagtcgaagagatcgcggtgcaacgcgggggtgaaccgccgtcggccatgcagggcgtg
acgaatgagctgctgaagatcatcccgacgttccgcgatcaaccgaatcgtcttctggtg
tgcgccacaaacttcattcgctcgctcgactccgcgtttctgcggcacggccgattcgac
tacgtgattcccatcgggctgcccgaccctgccgctcgagagtcgatctgggcgcgctac
attccggcgcagtcgctcggcgaggtcgatctttcggccctggtcgagcgcaccgaaggg
ttctcgcccgccgacatcgagtacgcggcgcgcaaggcctcccagagcgcgctcgagaag
gcgctcttctcgcccgtctcccccgacggctctgcccccgcctcggggccgcgaactgaa
gactatctcgaagccatcaactccacccgggccaccgtctcggccgaggtcgcccaagcc
ttcctcgaagacatcgagggcatcgcccgcctctga
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