Subtercola sp. PAMC28395: KPL76_00175
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Entry
KPL76_00175 CDS
T07261
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KPL76_00175
09124 Replication and repair
03420 Nucleotide excision repair
KPL76_00175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
subt03021
]
KPL76_00175
03400 DNA repair and recombination proteins [BR:
subt03400
]
KPL76_00175
Enzymes [BR:
subt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPL76_00175
Transcription machinery [BR:
subt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KPL76_00175
DNA repair and recombination proteins [BR:
subt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KPL76_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QWT23913
UniProt:
A0A975SHA1
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All DBs
Position
30167..31807
Genome browser
AA seq
546 aa
AA seq
DB search
MPDGPLIVQSDRTVLLEVAHPDADTARHELAVFAELERAPEHIHTYRITRLGLWNARAAG
HTAEEILGTLERYSKFAIPQSVSIDIAETVARYGRLVIERQSDGVLTLRSTDEAVLAEIV
KGKRISPLLPSKLASDTYVIEPWARGQLKQELTKLGWPAEDFAGYTPGTPHEISLAEDGW
HLRDYQQKAIDNFFERGSGVVVLPCGAGKTLVGAGAMATAKTNTLILVTNTVSARQWRSE
LLKRTSLTEDEIGEYSGQVKEVKPVTIATYQILTAKRKGAYAHLELLDALDWGLVVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AECFEVRIDLPQTDRLIYAAASDDERYRLAATAPAKLDVVKQLVAKHHGERILVIGQYLD
QLDTLAAELGVPELTGSTPIVERERLYQAFRDGDEPILVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKESGLSANFYTLVARDTVDQDFAQNRQRFLAEQGYSYTILD
AQSLAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatggccccctgatcgttcaaagcgatcgcaccgttctgctcgaagtcgcccac
cccgacgccgacaccgcccgccacgagctggccgtcttcgccgagctcgaacgggcaccc
gagcacatccacacctatcgcatcacccggctcggtctctggaacgcccgcgccgccggc
cacaccgccgaagagatcctcggcacgctcgagcgctactcgaagttcgccatcccccag
tcggtgtcgatcgacatcgccgagacggttgcacgctacgggcgcctcgtcatagagcgg
cagtccgacggcgtgctcaccctccgctccaccgatgaagcagtgcttgctgagatcgtc
aagggcaagcgcatctcgccgctgctgccatcgaagctggcgtcagacacctacgtgatc
gagccctgggcccgggggcagctgaagcaggagctcaccaagctcgggtggcctgcagaa
gatttcgccggatacaccccgggtaccccgcacgagatctcgcttgccgaagacggctgg
cacctgcgcgactaccagcagaaggccatcgacaacttcttcgaacgcggttcaggcgtc
gtggtactcccctgcggcgccggcaagacgttggtcggcgccggcgcaatggccaccgcg
aagaccaacacgctcatcctcgtgacgaacacggtctctgcccgccagtggcgttcagaa
ctgctcaagcgcacctcgctgaccgaagacgagatcggcgagtactccggccaggtcaag
gaggtcaagcccgtgaccatcgcgacctaccagatcctcacagccaagaggaagggcgcc
tacgcgcacctggagctcctcgacgcccttgactgggggctggtcgtctacgacgaggtg
catctgctgcccgcacccgtcttcaagctcacagccgagctgcaggcccgacgtcggctc
ggcctcacggccaccctggtgcgcgaagacggccgggaaggcgatgtgttcagcctgatc
gggccgaaacgcttcgacgccccctggaaggagatcgaggcgcaggggttcatctcgccg
gccgaatgcttcgaggtccgcatcgacctgccccagaccgaccggctcatctacgccgcc
gcctccgacgatgagcgctaccggctcgctgcgacagcacccgccaaactcgacgtcgtg
aagcagctcgttgcgaaacaccacggcgagcgcattctcgtcatcggccagtacctcgac
cagctcgacacgctcgccgccgagctgggcgtgcccgagctcaccggctcgacacccatt
gtcgaaagggagcgcctgtaccaggccttcagagacggcgacgagcccattcttgtcgtc
agcaaggtcgccaacttctccgtcgatctgcccgaggccaccgtggcgattcaggtctcc
ggttcgttcggttcccggcaggaggaggcccagcgtctcggtcgcctgctccgcccgaag
gagtcaggtctttctgcgaacttctacacgctggtggcccgcgacaccgtcgaccaggat
ttcgcccagaaccggcagcgttttctcgccgagcagggctacagctacacgattctggat
gcccagtccctggccgcgtaa
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