Subtercola sp. PAMC28395: KPL76_02290
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Entry
KPL76_02290 CDS
T07261
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPL76_02290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
subt03019
]
KPL76_02290 (recQ)
03400 DNA repair and recombination proteins [BR:
subt03400
]
KPL76_02290 (recQ)
Enzymes [BR:
subt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPL76_02290 (recQ)
Messenger RNA biogenesis [BR:
subt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPL76_02290 (recQ)
DNA repair and recombination proteins [BR:
subt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KPL76_02290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QWT24271
UniProt:
A0A975SHP1
LinkDB
All DBs
Position
complement(468975..470969)
Genome browser
AA seq
664 aa
AA seq
DB search
MTFDSAAPTLDDAVSTRVGGGSAEARPEQASPEQARPEQASPEQVSPEQAGLEQADPARQ
LLKRVFGYDDFRGDQAAVISHVAAGGDAVVLMPTGGGKSLCYQIPALLRDGTGVVISPLI
ALMQDQVDALLAVGVRAAFLNSTQDASERDRVESAYLAGELDLLYVAPERLSSESTKRFL
DNGRIALFAIDEAHCVSQWGHDFRPDYLSLSDLADRWPEVPRIALTATATAATHTEITQR
LKLGDARHYVASFDRPNIRYRIEGKGEVRQQLLSLIRREHDGDAGIVYCLSRKTVEQTAQ
FLSANGVNALPYHAGLESGLRSRTQARFLREDGVVIVATIAFGMGIDKPDVRFVAHIDLP
KSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQRRMIEQSPGDLAHRRKLSSHLDAMLA
LCETIDCRRVNLLGYFGQTSVPCGNCDTCLVPPVSWDGTIPAQKLLSTVVRLQRERNQKF
GAGHLIDILRAKKTPRVDQYGHDELAVWGIGSELSEQQWRSVVRQLLAKGLLAVNDDGFG
TLVLAPASIDVLSGAVTVPMRLEPDRAAGSSGSGTGGSRAKQARAVADLPDDAISLFEAL
RAWRSTTAKTMGVPAYVIFHDATLREIAVRRPLVAADLDGVAGIGQKKLDTFGEGLLEVV
AANV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgactctgctgcacccactctcgatgatgcggtgagtacgcgggtcggcggc
gggtctgcagaggccagacctgagcaggccagccctgagcaggccagacctgagcaggcc
agccccgagcaggtcagccccgagcaggcagggctcgagcaggctgacccagcgcgccag
ttgctcaagagagtgttcggttacgacgacttccgcggcgaccaggccgccgtcatcagc
cacgtggccgcgggtggtgacgctgttgtgctgatgccgaccggcggtggcaagtcgttg
tgttaccagatccctgcgctccttcgtgacggcaccggggttgtcatctctcctctcatt
gctctcatgcaggatcaggtcgacgctttgttggcggtcggggtgagggcggcattcctg
aactcgacccaagacgcctcagaacgcgatcgggtcgagagtgcgtatctcgccggcgaa
ctcgatctgctgtacgtggcaccagagcgactctcgtccgagagcacgaagcggtttctc
gacaacgggagaattgctctcttcgcgatcgacgaagcccactgcgtgtcgcagtggggc
catgacttcaggcccgactacctgagtctttccgatctggccgaccgctggcccgaggtt
ccgaggatcgccctgacggcgacggcgacggctgcaacccacaccgagatcacgcagaga
ctgaaactcggcgacgcgcggcactacgtcgcgagcttcgatcggccgaacatccggtat
cgcatcgagggtaaaggcgaggtgcggcagcaactgctctcgttgatccgtcgcgagcac
gatggcgacgcgggcatcgtgtactgcctctcacgcaagaccgtcgagcagacagcgcaa
ttcctttcggcgaacggggtcaacgcgctgccgtaccacgcggggctggagagcgggctg
cgctcccgcacccaggcacggttcctgcgcgaagacggcgtggtcatcgtggccacgatc
gcgttcggcatgggtatcgacaagcccgacgtgaggttcgtcgcgcacatcgacctgccg
aaatcggtggagggctactaccaggagacaggtcgggccggtcgagacggccaaccgtcg
acggcctggctggcctacggcctgcaagacgtggtgcagcagcgcagaatgatcgagcag
tccccgggtgacctcgcacaccgccgcaaactctcctcccacctcgatgccatgctcgcg
ctctgcgagacgatcgactgccggcgggtgaacctgctcggctacttcggccagacgagt
gtgccatgcggcaactgtgacacctgcctggtgccgcctgtctcgtgggatggcaccatt
cccgctcagaagctgctttcgaccgtggtgcggttgcagcgcgaacgcaaccagaagttc
ggtgcagggcatctcatcgacatcctgcgcgcgaagaagacgcccagggtcgaccagtat
ggtcacgatgagctcgcggtctggggcatcggttcagaactctccgagcagcagtggaga
agtgtggtgcgccaactgctggcaaagggccttcttgcagtgaacgacgacgggttcggc
acccttgtgcttgcgcctgccagcatcgacgtgttgagcggggctgtgacggtgccgatg
cgattggagccagaccgcgccgcgggttcgtccggctcaggcacgggcggttcgcgcgcg
aaacaggcgcgcgcagttgccgacctgccagacgacgccatctcgcttttcgaggccctt
cgtgcctggcggtcgacgacggccaagacgatgggtgtgcccgcgtacgtgatcttccac
gatgcgacactccgcgagatcgccgtgaggcgaccgctggttgccgctgacctcgacgga
gtcgccggtatcggccagaagaagctcgacaccttcggcgaggggctgctcgaagtcgtt
gcggccaacgtctga
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