Subtercola sp. PAMC28395: KPL76_08480
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Entry
KPL76_08480 CDS
T07261
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt02024
Quorum sensing
subt03060
Protein export
subt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KPL76_08480 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KPL76_08480 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KPL76_08480 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
subt02044
]
KPL76_08480 (ffh)
Enzymes [BR:
subt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KPL76_08480 (ffh)
Secretion system [BR:
subt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KPL76_08480 (ffh)
Eukaryotic Sec-SRP protein
KPL76_08480 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
AAA_31
AAA_30
Zeta_toxin
cobW
ArsA_ATPase
MMR_HSR1
AAA_24
APS_kinase
AAA_18
AAA_33
ABC_tran
TsaE
AAA_16
NPHP3_N
NACHT
AAA_25
Helicase_RecD
AAA_5
AAA_26
MobB
Motif
Other DBs
NCBI-ProteinID:
QWT22838
LinkDB
All DBs
Position
1834264..1835847
Genome browser
AA seq
527 aa
AA seq
DB search
MATFGTLSDRLADTFRNLRTKGKLSPADVDGTVREIRRALLDADVALDVVKDFTGKVRER
ALGDEVNKALNPAQQVVQIVNEELIAILGGEARRINFAKKPPTIIMLAGLQGAGKTTLAG
KLAKWLAKDNHTPLLVAADLQRPNAVQQLQVVAGQAGVAVYAPEPGNGVGNPVKVAKDSI
KWAIDKQYDVVIVDTAGRLGVDADMMKQAADIRKAVDPDEVLFVIDAMIGQDAVATAKAF
QAGVDFTGVVLTKLDGDARGGAALSVASVTGRPIIFASTGESLDDFEPFYPDRMASRILD
LGDILTLIEQAQGAFDEEEAMKVAEKFRTDTFTLEDFLGQMQQLRGAGSLKKMIGMLPGA
GAMKEQLANFDEREIVRTEAIIQSMTKAERQNPKLLNGSRRVRIARGSGMTVTDVNQLVQ
RFEQAAKMMKTVARGGVPQIPGMGPIPGAGFGGGRGKVQQKKKGSKSGNPAKRAIENAAL
ASGEKLPAAGASTPAGSGFGLGSGGAGAAAGGPSEKELESLQKFLRR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttcggaaccctttctgaccgcttagcggacacctttcgcaacctccgcacg
aagggcaagctgagcccggccgacgtcgacggcaccgtccgcgagattcgccgcgccctg
ctcgatgccgacgtggcgctcgacgtggtcaaggacttcaccggcaaggtgcgcgagcgc
gcgctcggtgacgaggtcaacaaggcgctgaacccggcccagcaggtcgtgcagatcgtc
aacgaggagctcatcgcgattctcggcggcgaggcccggcgcatcaacttcgccaagaag
ccgccgaccatcatcatgctcgcagggctccagggtgccggtaagacgaccctcgccggc
aagctggcgaagtggctcgcgaaagacaaccacaccccgctgctcgtcgcggccgacctc
cagcgccccaacgccgtgcagcagctgcaggtcgttgcagggcaggccggggtcgcggtc
tacgctcccgagcccggcaacggtgtcggcaacccggtcaaggtcgccaaagactcgatc
aagtgggccatcgacaagcagtacgacgtggtcatcgtcgacacggccggccgcctgggt
gtcgacgccgacatgatgaagcaggccgcagacatccgcaaggccgtcgaccccgacgaa
gtgctcttcgtgatcgacgcgatgatcgggcaggatgctgtggccacagccaaggcgttc
caggccggtgtcgacttcaccggtgtcgtgctcaccaaactcgacggtgacgcccgcggt
ggtgcggccctgtcggtcgcgtcggtgaccggtcgcccgatcatcttcgcgtcgacgggc
gagtcgctcgacgacttcgagccgttctaccccgaccgcatggcgagccgcattctcgac
ctcggtgacatcctgaccctcatcgagcaggcacagggcgccttcgacgaagaagaggcg
atgaaggtcgcggagaagttccgcaccgacacgttcaccctcgaagacttcctcggccag
atgcagcagctgcgcggggccgggtcgctcaagaagatgatcggcatgctgcccggtgcc
ggggcgatgaaggagcagctggccaacttcgatgagcgcgaaatcgtgcgcactgaagcg
atcatccagtcgatgaccaaggcagagcggcagaacccgaagctcctcaacggctcgcgc
cgggtgcggatcgcgcgcggttctggcatgacggtcaccgacgtgaaccagctggtgcag
cgcttcgagcaggccgcgaagatgatgaagacggttgctcgcgggggagtgccacagatt
cccggaatggggccgatccccggtgccggtttcggcggcggtcgcggcaaggtccagcag
aagaagaagggctcgaagtcgggcaacccggccaagcgcgccatcgagaacgcggcattg
gcctcgggcgagaagctgccggctgccggtgcaagcacgcctgctggctcaggtttcggc
ctgggcagcggcggtgccggtgcggccgcgggcgggccgagcgagaaggaactcgagtcg
cttcagaagttcctgcgccgctga
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