Subtercola sp. PAMC28395: KPL76_08880
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Entry
KPL76_08880 CDS
T07261
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KPL76_08880 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
subt03019
]
KPL76_08880 (orn)
03009 Ribosome biogenesis [BR:
subt03009
]
KPL76_08880 (orn)
Messenger RNA biogenesis [BR:
subt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KPL76_08880 (orn)
Ribosome biogenesis [BR:
subt03009
]
Eukaryotic type
Pre-60S particles
RNases
KPL76_08880 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QWT22905
LinkDB
All DBs
Position
complement(1923876..1924496)
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AA seq
206 aa
AA seq
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MSAQTDRLVWIDCEMTGLDLAIDELVEVAVVITDFDLNLVDPGFTIVIKPDDSALSNMND
FVRNMHATSGLDALIPNGVSLAEAEYEVLEYILKFVPNEMKAPIAGNTIGTDRMFLAKYM
PRVDAHLHYRSVDVSSIKELARRWFPPIYFHAPAKDGGHRALADILESIRELEYYRKAVF
VAPPGPASADLKTIAADVVNEFAAKL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacaaacagaccgactggtctggatcgactgtgaaatgaccgggctcgacctg
gcgatcgacgaactggtcgaggtggccgtcgtcatcaccgacttcgacctgaacctggtc
gaccccggcttcaccatcgtcatcaagcccgacgactctgcgctgtcgaacatgaacgac
ttcgtgcgcaacatgcacgccacgagcggcctcgacgcgctcatcccgaacggcgtcagc
ctggcggaggcggagtacgaggttctcgaatacattctgaagttcgtaccgaacgagatg
aaggccccgatcgcgggcaacaccatcggcaccgaccgcatgttcctggcgaagtacatg
ccgcgggtcgacgcccacctgcactaccgcagcgtcgacgtgtcgtcgatcaaagaattg
gcccgacgctggttcccgcccatctacttccacgcacccgccaaagacggcggccaccgc
gccctcgccgacattctcgagtcgatccgcgaactcgagtattaccgcaaggccgtgttc
gtggctcctccgggccccgcatccgccgacctcaagaccattgcagcagacgtcgtgaac
gagttcgccgcaaagctgtaa
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