Subtercola sp. PAMC28395: KPL76_10885
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Entry
KPL76_10885 CDS
T07261
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
subt
Subtercola sp. PAMC28395
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
subt03019
]
KPL76_10885
Enzymes [BR:
subt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPL76_10885
Messenger RNA biogenesis [BR:
subt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPL76_10885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
DUF6634
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QWT23238
LinkDB
All DBs
Position
complement(2355155..2357629)
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AA seq
824 aa
AA seq
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MPGAPVAGASGPQTLSPAERYALSKAKVAGPLVDDFRQGLGFDLDPFQIESCRLLEAGNS
VLVAAPTGAGKTIVAEFAVFMAMKQRSAKVFYTAPIKALSNQKFQEFVTEYGPDEVGLLT
GDTNINPQARIVVMTTEVLRNMLYAESDLLTNLAFVVMDEVHYLADRFRGAVWEEVIIHL
PASVRLVSLSATVSNAEEFGDWLQAVRGDTEVIVSEERPVPLDQHMLVRHKLLDLFDGTG
EATSSRVNPELMRIARSTGAPQSRNRNDRRGRSGNSAHRPQHTQAPRMDRAELTDLLDEH
NLLPAIFFIFSRVGCDQAVKQVLRAGVRLTTNEEREEIRHIVDERCRTLLDEDLAVLGYW
EWLEGLERGVAAHHAGLLPAFKEVVEELFQKKLVRVVFATETLALGINMPARTVVLESLE
KYNGEARVPITPGEYTQLTGRAGRRGIDVEGHSVIQWRDGVDPQAVASLASRRTYPLNSS
FRPTYNMAVNLIDQFGRARTRDSLELSFAQFQADRAVVDLAHKVRQHEESLAGYEKSMTC
HLGDFAGYAALRRELSDVERSGAGRADTQSRAERDSRQKKITELRRRMKSHPVSHCPDRE
GHARWAERWYRLKRETDQLVAQINNRTGAIAKVFDRICEVLLQLEYVQSDPQGELTLTPT
GKTLKRIYGERDLLVAECIRRGVWANLDPAGLAALACSLIYEPRRDESDMPERFLPRGPF
RGALEKTQELWADLQELEAHHRLPGTSPISVGLAKPMHEWARGASLDTVLFDADLAAGDF
VRWTKQTIDLLDQLQNLSDAKVATTARLALDLVKRGIVAYSSVA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggagcgccggtcgccggtgcttccgggccgcagacactctcgccagccgaacgg
tacgctctcagcaaggcaaaggtcgctggccccctcgtcgatgatttccggcagggactg
ggcttcgacctcgatcccttccagatcgaatcgtgccggttgctggaggccgggaacagc
gtgctcgtcgccgcgccgacaggcgcaggcaagaccatcgtggcggagttcgccgtcttc
atggcgatgaaacagcgatcagcgaaggtcttctacaccgcgccgatcaaggcgctcagc
aaccagaagttccaggaattcgtcacagaatacggtccggatgaagtcgggctcctgacg
ggcgacacgaacatcaatccacaggcacgcatcgtggtcatgaccaccgaggtcctgcgc
aacatgctctacgccgaatcagatctgctcacgaacctcgccttcgtcgtcatggacgag
gtgcactacctcgccgaccggtttcggggcgccgtctgggaagaggtgatcatccacctg
cctgcctccgtgcggctcgtctcgctgagtgcgaccgtgtcgaatgccgaggagttcgga
gactggctccaggcggttcgcggtgacaccgaggtgatcgtgtctgaggaacggccggta
ccgctcgatcagcacatgctcgtgcgccacaagctgctcgacctgttcgacggcaccggc
gaagccacctcgagcagggtcaaccccgagctgatgcgtatcgcccggtcgaccggcgca
ccgcagtctcgcaataggaatgaccgtcggggtcgcagcggcaattccgcacatcgcccg
cagcacacccaggcaccccgcatggatcgcgccgaactgaccgatctgctcgacgaacac
aacctcctgccagcgatcttcttcatcttcagccgcgtcggatgcgaccaggccgtgaag
caggttctccgcgcgggagtcaggctcacgacgaatgaagagcgcgaggagatccgccac
atcgtcgatgaacggtgccgcactcttctcgacgaagatcttgcagtgctcggctactgg
gagtggctcgagggcctcgagcgtggagtggccgcacatcacgccggcctgcttccggcg
ttcaaggaggtcgtcgaggagctcttccagaagaagctcgtgcgggtcgtattcgccaca
gagacgctggcgctcggcatcaacatgccggcgcgcaccgtggtgctcgagagcctcgag
aagtacaacggtgaggcgcgcgtgcccatcactccgggggagtacacccagctcaccggg
cgggctgggcgaagaggcatcgacgtcgaaggccattcggtcatccagtggcgtgatggc
gtcgacccccaggccgtagcctcgctcgcctcccggcgcacgtacccgctcaattcgagc
tttcgacccacctacaacatggccgtgaacctcatcgaccagttcggtcgggcccgcacg
cgcgattcgctcgagctgtcgttcgcgcagttccaggccgaccgagcggtggtcgacctt
gcacacaaggtcaggcaacacgaggagtcgctcgccggctacgagaagtcgatgacctgc
catctgggtgacttcgccgggtacgccgcacttcggcgggagctcagcgacgtcgagcgc
tcgggcgcgggcagggccgacacgcagtcgagggctgaacgcgacagccgccagaagaag
atcaccgagcttcgccgacgaatgaagtcgcacccggtctcgcactgccccgacagggag
ggccatgcccgctgggctgagcgctggtaccgcctgaaacgcgagaccgaccagctcgtc
gcccagatcaacaatcgaacgggggccattgccaaggtcttcgaccgcatctgcgaggtg
ttgctgcagctggaatacgtgcagtcagacccgcagggcgaactcactctcacgccgacg
ggcaagacgctgaaacgcatctacggcgaacgtgaccttctggtggccgagtgcatccgc
cggggggtctgggcgaacctcgaccctgcagggctcgcggcgctggcgtgctcgctgatc
tacgaaccccgtcgcgatgagagcgacatgccggagcggtttctgccacgcgggcccttc
cggggcgcgctcgagaagacccaggagttgtgggccgatctgcaggagctcgaagcccac
catcgccttcccggcacgtcaccgatctccgtcgggctggccaagcccatgcacgagtgg
gctcgcggggccagcctcgataccgtgctcttcgacgccgacctggccgcaggagacttt
gtacgatggaccaagcagaccatcgatctgctcgatcaactgcagaatctgtcagacgcc
aaggttgcgaccacggcgagactggcactcgatctggtgaagcgcggcatcgtcgcgtac
tcatcggtagcgtga
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