Subtercola sp. PAMC28395: KPL76_10975
Help
Entry
KPL76_10975 CDS
T07261
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KPL76_10975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
subt03000
]
KPL76_10975
03400 DNA repair and recombination proteins [BR:
subt03400
]
KPL76_10975
Enzymes [BR:
subt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KPL76_10975
Transcription factors [BR:
subt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KPL76_10975
DNA repair and recombination proteins [BR:
subt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KPL76_10975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
TraC
AAA_31
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QWT25414
UniProt:
A0A975SJV7
LinkDB
All DBs
Position
2373152..2374783
Genome browser
AA seq
543 aa
AA seq
DB search
MKAKDSRFDGQFITGVHTTGIYCRPSCPARTPHPQNVSFFVTAAAAHQAGLRACKRCLPD
AVPGSPEWNLRDDLAARVMRLIDDGVVDREGVDGLARRVGYTPRHLTRVLTAELGAGPQA
LARAHRAQSARVLLQSTELPLAQVVFASGFSSVRAFNETILAVYETSPSRLREQGRAGRR
HSVAAAADTPVGHGVDSATAPSIDTAAPTIDPSSAGTCAAVPRPTHPLSSGPAQSSTTAP
RAAPASDAISAHCTSGRVRLTLPARPPFDGTGVIDFLAARAVSGVEDVSDGTYRRSLLLP
HGQVVIAVTDSSGGVVCTAQLENLADVSTLASRVRRLLDLDADSQAIDEVLSQVPELRAR
VKALPGIRMPGSTDPHEVVFRALVGQQISVKAARTVLGRLATELGDTVTVGSDAAITRLF
PTAAQIAEHGREVLRGPARRVDTIIHTAEALASGEISLDVGTSHAQLLEQLTAVPGIGEW
TAGYVAMRVLGAPDVLLDGDLAARAGAAKLGLPSGRRELRAWAERVSPWRSYLGMHLWRA
AAG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaaagacagccggttcgacgggcagttcatcacgggcgtgcacacgaccgga
atctactgtcgccccagctgcccggcccgcactccgcacccgcagaacgtgtcgttcttc
gtgaccgcagcggccgcacaccaggcggggttgcgggcctgcaaacgctgcctccccgac
gccgttcctggttcacccgagtggaacctgcgcgacgatctcgcagccagggtcatgcgc
ctgatcgacgatggcgtcgtcgatcgcgagggggtcgacggtcttgccaggcgcgtgggc
tacacccctcggcacctgacgagagtactcaccgcggagctcggcgccggcccgcaggcg
ctggccagagcccaccgggcccagagtgcgcgagtgcttctacagagcaccgagctgccg
ctcgcccaggtggtgttcgcgagcggcttctcgagcgttcgcgccttcaacgagacaatt
ctggcggtctacgagacatctcccagccggttgcgcgagcagggccgagcaggccgacgc
cactccgtcgcggccgcagccgacacccccgtcggccacggcgtcgactctgccacggct
cccagcatcgacactgccgctcccaccattgacccttcctctgctggcacctgtgccgcc
gtgcctcggcccacccacccgctcagttccggccctgcgcagagctccaccactgcgccc
cgtgccgcccctgcctccgacgccatctcggcgcactgcacgtcggggcgcgtgaggctg
accctccctgcgcggcctccgttcgacggcaccggtgtgatcgacttcctcgctgcccgc
gcggtctccggagtcgaagacgtcagtgacggcacctaccgccgcagcctgctgctcccc
cacggccaggtcgtcatcgcggtgaccgactccagcggcggagtcgtctgcaccgcccag
ctcgagaaccttgccgatgtgtcgaccctcgcgtcacgggtccgccgactgttagacctc
gacgctgactcccaggcgatcgacgaggtgctgtcccaggtgccagagctccgggcccgg
gtgaaagccctgccgggcatccggatgcccggcagcaccgacccgcacgaagtcgtcttt
cgcgccctggtgggccagcagatctctgtgaaggcggcacgaaccgtgctggggcgactc
gcgactgagctgggagacacggtgacggtcggctccgacgcggcgatcacccggttgttc
ccgaccgcggcccagatcgccgagcacggccgggaagtgctgcgggggcctgcgcggcgc
gtcgacacgatcatccacaccgccgaagcgctcgcgagcggcgagatctcgctcgacgtc
ggcacctcgcacgcacaactgctcgagcaattgacggccgtgccggggatcggtgagtgg
accgcggggtacgtcgcgatgcgcgtactcggggcacccgacgtgctgctcgacggtgac
ctggctgcgcgggcgggtgcggcgaagctcgggctaccctctggcaggcgtgaactgcgg
gcatgggcggagcgggtctcaccctggaggagttacctcggcatgcacctctggcgagcc
gcggccgggtga
DBGET
integrated database retrieval system
