Subtercola sp. PAMC28395: KPL76_12295
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Entry
KPL76_12295 CDS
T07261
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPL76_12295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
subt03019
]
KPL76_12295
03016 Transfer RNA biogenesis [BR:
subt03016
]
KPL76_12295
Enzymes [BR:
subt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KPL76_12295
Messenger RNA biogenesis [BR:
subt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPL76_12295
Transfer RNA biogenesis [BR:
subt03016
]
Prokaryotic type
tRNA degradation factors
KPL76_12295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
CdsD_C
KH_KhpA-B
DUF1322
KH_2
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QWT23486
LinkDB
All DBs
Position
complement(2675663..2677951)
Genome browser
AA seq
762 aa
AA seq
DB search
MEGPEIKFAEAVLDNGSFGTRTIRFETGRLAQQAQGAVAAYLDEETMLLSATSVSKHPKD
NFDFFPLTIDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVTGLRNEVQ
VVITVLSIAPGEFYDALAINAASASSQISGVPFSGPIGAVRLALIGSQWVAFPTAAQLAD
AVFDIVVAGRVVTDKNGNEDVAIMMVEAEATEHSWNLIQAGATKPDEAVVSQGLQASKPF
IKQLVGAQVVLAQQSAKEIAHYPVFLPYSKESYDNVAGLAYDELVRIYQIADKIERQDAD
DALKERVKVAITEKVEAGAIPASVLAEFSAAYKSVTKVVVRGRILRDGIRIDGRGLSDIR
PLDAEVEVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYMHHYNFPPY
STGETGRVGTPKRREIGHGFLAERALVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKVAGTSEF
ITAIQLDTKLDGIPTSVLDGALGQAKAARTAILEVLNAAISTPDEMAPTAPRVISVQIPV
DKIGELIGPKGKTINQIQDDTGADISIEDDGTVYIGAVDGPSAEAARMAVNAIANPLNPE
VGERFLGTVVKIATFGAFVSLMPGKDGLLHISEVRKLAGGKRVENVEDVLGVGQKIQVEI
TKIDDRGKLSLAPVIDEAVPADTEGSAAHSAGPEAPAEGAEV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagaaatcaaattcgccgaagccgttctcgacaacggttcattcggcaca
cgcacgatccgcttcgagaccggccgcctcgcgcagcaggctcagggcgcggttgctgcg
tacctcgatgaagaaaccatgctgttgagcgccacgagcgtctcgaagcacccgaaagac
aacttcgacttcttcccgctcaccatcgacgtcgaagagcgctcgtatgcagcaggcaag
atccccggctcgttcttccgtcgtgaaggccgcccctcgaccgaggccatcctcgtctgc
cgcctgatcgaccggccgctgcgcccgtcgttcgtcaccggtctccgcaacgaggtccag
gtcgtcatcaccgtgctgagcatcgctcccggtgagttctacgatgctctggccatcaac
gccgcctcggcgtcgagccagatctccggtgttccgttctccggcccgatcggtgcagtt
cgtctcgcgctcatcggcagccagtgggtcgcattcccgaccgcggcgcagctcgctgac
gctgtcttcgacatcgtggttgccggtcgtgtcgtcaccgacaagaacggcaatgaagac
gtcgccatcatgatggtcgaggctgaggccaccgaacacagctggaacctgatccaggcc
ggcgccaccaagcccgacgaggctgttgtcagccagggcctccaggcctcgaagcccttc
atcaagcagctcgtcggcgcgcaggtcgttctcgcccagcagtctgcgaaggagatcgca
cactacccggtcttcctgccgtactcgaaggagtcctacgacaacgtcgccggcctcgcc
tacgacgagctcgtgcgtatctaccagatcgccgacaagatcgagcgccaggacgccgat
gacgctctgaaagagcgcgtcaaggtcgccatcaccgagaaggtcgaagctggcgccatc
cccgcgagtgttctcgccgagttctctgcggcgtacaagtcggtcaccaaggtggtcgtt
cgcggtcgtatcctccgcgacggaatccgcatcgacggccgtggcctctccgacatccgc
ccgctggatgccgaggtcgaggtcattccccgcgtgcacggttcagcgatcttccagcgc
ggtgagacccagatcctgggtgtcaccacactgaacatgctgaagatggagcagcagatc
gactcgctgagccccgtcaccaagaagcgctacatgcaccactacaacttcccgccgtac
tcgaccggtgagactggccgcgtcggtaccccgaagcgtcgcgagatcgggcacggcttc
ctcgccgagcgcgccctcgtgcccgtgctgccttcgcgtgaagacttcccgtacgcgatc
cgccaggtctccgaggcactcggctccaacggctctacctccatgggatccgtgtgtgcg
tcgactctctccctgctcaacgccggtgtgccgctgcgcgccccggttgccggcatcgcc
atgggcctcgtctccgacgaggtcgacggtgagacccgctacgcagccctcaccgacatc
ctcggtgcagaagatgcgctgggcgacatggacttcaaggttgccggtacgagtgagttc
atcacggccatccagctcgacacaaagctcgacggtattccgacgtcggtgctcgacggc
gcgctcggccaggcgaaggctgcgcgaaccgcgatcctcgaggttctgaacgccgcaatc
tccacgcctgacgagatggccccgaccgcgccccgcgtgatctcggtccagatcccggtc
gacaagatcggtgagctgatcggcccgaagggcaagacgatcaaccagatccaggacgac
accggagccgacatctcgatcgaagacgacggcaccgtgtacatcggcgctgtcgacggc
ccctcggccgaggctgctcgcatggcggtcaacgccattgcgaacccgctgaaccccgag
gtcggcgagcggttcctgggcacggtcgtcaagatcgcgaccttcggtgcgttcgtgtcg
ctcatgcccggcaaagacggcctgctgcacatcagtgaggttcgcaagctcgccggtggc
aagcgtgtcgagaacgtcgaagacgtgctcggtgtcggccagaagatccaggtcgagatc
accaagatcgacgaccgcggaaagctgtcgctcgccccggtgatcgacgaggcagtccct
gctgacaccgaaggctccgcagcgcacagcgcgggccctgaggcacctgcagaaggcgcc
gaagtatag
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integrated database retrieval system
