Subtercola sp. PAMC28395: KPL76_13440
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Entry
KPL76_13440 CDS
T07261
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
subt
Subtercola sp. PAMC28395
Pathway
subt03420
Nucleotide excision repair
subt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
subt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KPL76_13440
03430 Mismatch repair
KPL76_13440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
subt03400
]
KPL76_13440
Enzymes [BR:
subt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPL76_13440
DNA repair and recombination proteins [BR:
subt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPL76_13440
MMR (mismatch excision repair)
Other MMR factors
KPL76_13440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QWT23678
UniProt:
A0A975XRQ5
LinkDB
All DBs
Position
complement(2932867..2936178)
Genome browser
AA seq
1103 aa
AA seq
DB search
MMISALEIAGKLGLPAPTPQQQAVIEAPLSPSIVIAGAGSGKTETMANRVVWLVANNLVP
VSEILGLTFTRKAAGELSQRIRSRLDQLAAAQRGDAAQRSDAAQRVAAAQPSAGVQPSDA
SQPTIAAFDPFDAPTVATYNSFANSIFRDNALLIGREGDSGILSEASAWQMARKIVTSST
DDRLITLDKPIDSLTEAVLSLSRAMSENVVTPSEVIALASDFEQLADLPTGSTRVKTLNA
SLRDAIVSVQALPVLVDLAEQYSAEKIRRGFVEYSDQVALALAITERVPRVIPDYRGRFR
VILLDEYQDTSVVQTRLLSQLFGGQPVMAVGDPHQSIYGWRGASAANLATFAVDFTGKRD
GARSFALSTSWRNPLRVLDVANTLVAPLTAASAVAVERLEARPDAGTGIVDAFYGETVTD
EAEAVARWLKHQLAIPDSRGAVRSAAMLCRSIKKIDAFTNALAEHGVPFHVLGLGGLLEE
PAVADLVSALRVIYYPAAESELVRLLTGARWRVGLRDVLVLSRVASWLAERDHHFATLDA
GVKQRLRNSVVADETRSLVDAVDFVATAPAGHRMLEGFSEAGVARIRQAGSQLAFLRTRT
GLDLLDLVNLVTQELLLDIEVAANERSYLGQASLDAFSEQVTAFVAADATAGLGVFLSWL
EEAEKRDKLSPRSEEPEPGTVQILTIHGAKGLEWDVVSVPRMVEDELPGKVQSKQGWLAF
GELPFEFRGDAAELPFLPWRSCDTQAEFATAKSEFNDEIVDRYAEEQRRLIYVAVTRARQ
SLLLSGSFWSIQTQHRGPGLFLTELAGHGLIAPDALPDAPQNEQNPLPESVRLVPWPSDP
LGSRQARVDAAAELVLSADPTLETEWSNDIDLLLAERAASAAGEPLAVPVRVAASRFKDY
VGDTPAVLRQLRRPMPERPYRQTRLGTRFHTWVENRYGIIGGSEQLDASLLELDADEALD
SDGLLVATRVADTAEDEALRALQATFEASEWSGLAPVDVEIEIHLALGGHIVVCKIDAVF
DRVGRYQIVDWKTGRAPVDAADLEAKQLQLALYRLAYSKWRGVEPELIDAVFYFVAVDEV
IAPARVYSETELLRLWEAVEAQV
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagcgcgctcgaaatcgctgggaagctcggtctgccggcacccactccgcag
caacaggcggtgatcgaggcccctctctccccgagcatcgtgatcgctggcgctggcagc
ggcaagaccgagacgatggccaaccgggtggtctggctcgtggccaacaatctcgttccg
gtctcggagatcctcggcctcactttcacacggaaggcggcaggggagctctcgcagcgc
atccggtcacgcctcgaccagctcgcggcagcgcagcgcggtgatgcagcccagcgcagt
gatgcagcgcagcgcgttgctgcagcccagcccagcgccggcgtgcagcccagcgacgcc
tcgcagcccacgatcgccgcattcgatccgttcgacgcgccgaccgtggccacgtacaac
tcgtttgccaacagcatctttcgagacaacgcccttctcatcggccgcgagggtgattcg
ggcatcctgagcgaagcatccgcgtggcagatggcgcgaaagatcgtgacgagcagcacg
gatgatcggctcatcaccctcgacaagcccatcgactcgctcaccgaggccgtactgtcg
ctcagccgtgccatgagcgagaacgtggtcacgccttccgaggtcatcgcgctcgcctcc
gacttcgagcagctcgccgacctgccgacgggctcgacacgcgtgaagacactgaacgcc
tccctgcgcgatgccatcgtctccgtgcaggcgctgccggtgctcgtcgatctggctgag
cagtactccgccgagaagatccggcgcggcttcgtcgagtactccgaccaggtcgccctc
gcccttgccatcaccgagcgagtgccccgagtgatccccgactatcgcggccgattccgc
gtcattctgctcgacgagtaccaggacacgagcgtcgttcagacaaggctcctgtcgcag
ctcttcggtggtcagccggtcatggctgtgggcgacccgcaccagtcgatctacggctgg
cgcggcgcaagtgcggcaaacctggcgacgttcgcggtggacttcaccggaaagcgtgac
ggcgccaggtctttcgcgctctcgaccagttggcgaaacccgctccgcgttctcgatgtc
gccaacaccctcgttgcgcccctcacggcggcatcggccgttgccgtcgaacgcctcgag
gcgcgccccgatgctggcacgggcattgtcgatgccttctacggcgagacggtcaccgat
gaggccgaggccgtcgcccgatggctcaagcaccagctcgcgatccccgattccaggggc
gcggtcaggtcggcagccatgctgtgccgttcgatcaagaagatcgacgccttcaccaac
gcgctggccgaacacggcgtgccgtttcacgtgctggggttggggggcctgctcgaagaa
cccgccgtcgctgacctcgtttcggcgctcagggtcatctactatccggcggccgaatcc
gaactggtgcgactgctcaccggagcccgatggcgtgtcggccttcgtgatgttctcgtt
ctcagtcgtgtcgcatcatggctcgccgaacgcgatcatcatttcgccactctcgatgcg
ggcgtgaaacagcgtctgcgcaactccgtggttgccgacgagacccggtctctggtcgac
gctgtggactttgtggcgacagcgcctgccggtcaccgcatgctcgaaggcttcagcgag
gcgggggttgcccgcatccgccaggcggggtcccagctcgcgttcctccgcacccgcacc
ggtctcgaccttctcgacctggtgaatctcgtcacccaggagctcctgctcgacatcgag
gtggcagcgaacgagaggtcgtacctcggccaggccagtctcgacgctttctccgagcag
gtcacggcgttcgtcgccgcggatgcgaccgcgggcctcggcgtcttcctctcgtggctc
gaagaggccgagaaacgcgacaagctctcccctcggtccgaggagccagaacccggaacc
gtgcagatcctcaccatccacggcgccaagggcctggagtgggacgtcgtttcagtgccg
cgaatggtcgaagacgagttgcccggcaaggtccagagcaagcaggggtggcttgcgttc
ggcgaacttccgttcgaattcaggggcgacgccgccgaactgccctttctgccgtggcgc
agctgcgacacccaggccgagttcgccaccgcgaagtcggagttcaacgatgagatcgtc
gaccgttacgccgaagagcagaggcgactcatctacgttgcggtgacccgtgccaggcag
agcctcctcctgagcggctcgttctggtcgatccagacgcagcaccgcggccctggcctg
tttctcaccgagctagcaggtcacgggctcatcgcacccgatgcccttcccgacgcccct
cagaacgaacagaatccgctgccggagtcggtgcggctcgtgccatggccgagtgacccg
ctgggttcacgacaggccagggtggatgctgcggcagaactcgtgctgagcgctgacccc
acgctcgagaccgagtggtcgaacgacatcgacctgttgctcgccgaacgcgcagcctca
gcagcgggggagcccctggccgtacccgttcgtgtagccgcctcccggttcaaggactac
gtcggagacacgcccgcggtgctgcggcagctccgacgcccgatgcctgagcgcccctac
cgccagaccaggctgggcacgcgctttcacacctgggtggagaaccggtacggcatcatc
ggcgggtctgagcaactcgatgcatcactgctcgagctcgacgccgacgaagcgctcgac
agtgacgggctgctggtcgccaccagggtcgcagacacggctgaagacgaagccttgcga
gcgctccaggcaacgttcgaggcatcggagtggtcagggcttgcgccggtcgacgtcgaa
atcgagatccacctggcgctgggcggccacatcgtggtctgcaagatcgatgccgtcttc
gacagagtcggccgctatcagatcgtcgactggaagaccgggcgtgccccggtggacgca
gccgatctcgaggcgaaacaactgcagctggcgctgtaccgactcgcgtactcgaaatgg
cgcggagtcgaacccgaactcatcgacgccgtcttctacttcgtggccgtcgacgaggtc
atcgcacccgcgcgggtctactccgagactgaactgctcagactctgggaggccgtcgag
gcgcaggtgtag
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