Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_0618
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Entry
ST398NM01_0618 CDS
T02043
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ST398NM01_0618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sud03021
]
ST398NM01_0618
03400 DNA repair and recombination proteins [BR:
sud03400
]
ST398NM01_0618
Enzymes [BR:
sud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ST398NM01_0618
Transcription machinery [BR:
sud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ST398NM01_0618
DNA repair and recombination proteins [BR:
sud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ST398NM01_0618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AFH68841
LinkDB
All DBs
Position
531654..535295
Genome browser
AA seq
1213 aa
AA seq
DB search
MKEVGSLIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGP
TKDWECSCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRM
GLLLDMSPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEG
IKDLLEEIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPII
PPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDA
LIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQ
CGLPKEMALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNR
APTLHRLGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLML
AAQNILNPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLH
TRIGVHASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPNRY
FIDPTTLGEGGLKEYFENEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKF
SSKAGITVGVADIVVLPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKD
QIQGELMQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREG
LTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIK
EGTEMIEPFIERIEGRYSKETIRHPETDEVIIRPDELITPEIAKKITDAGIEQMYIRSAF
TCNARHGVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDIT
QGLPRIQEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRI
IVEIGQPVQRGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVM
VRQMLRKVRIIEAGDTKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLET
ESFLSAASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAK
PVAEVESQTEVTE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaggtaggctccttgattgatgtaaataatttccattatatgaaaataggattg
gcttcacctgaaaaaatccgttcttggtcttttggtgaagttaaaaaacctgaaacaatc
aactaccgtacattaaaacctgaaaaagatggtctattctgtgaaagaattttcggacct
acaaaagactgggaatgtagttgtggtaaatacaaacgtgttcgctacaaaggcatggtc
tgtgacagatgtggagttgaagtaactaaatctaaagtacgtcgtgaaagaatgggacac
attgaacttgctgctccagtttctcacatttggtatttcaaaggtataccaagtcgtatg
ggattattacttgacatgtcaccaagagcattagaagaagttatttactttgcttcttat
gttgttgtagatccaggtccaactggtttagaaaagaaaactttattatctgaagctgaa
ttcagagattattatgataaatacccaggtcaattcgttgcaaaaatgggtgcagaaggt
attaaagatttacttgaagagattgatcttgacgaagaacttaaattgttacgcgatgag
ttggaatcagctactggtcaaagacttactcgtgcaattaaacgtttagaagttgttgaa
tcattccgtaattcaggtaacaaaccttcatggatgattttagatgtacttccaatcatc
ccaccagaaattcgtccaatggttcaattagatggtggacgatttgcaacaagtgactta
aacgatttataccgtcgtgtaattaatcgaaacaatcgtttgaaacgtttattagattta
ggtgcacctggtatcatcgttcaaaacgaaaaacgtatgttacaagaagctgttgacgct
ttaattgataatggtcgtcgtggtcgtccagttactggcccaggtaaccgtccattaaaa
tctttatctcatatgttaaaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaa
cgtgttgactattcaggacgttcagttatcgcggtaggtccaagcttgaaaatgtaccaa
tgtggtttaccaaaagaaatggcacttgaactgtttaaaccattcgtaatgaaagaatta
gttcaacgtgaaattgcaactaacattaaaaatgcgaagagtaaaatcgaacgcatggat
gatgaagtttgggacgtattggaagaagtaattagagaacatcctgtattacttaaccgt
gcaccaacacttcatagacttggtattcaagcatttgaaccaactttagttgaaggtcgt
gcgattcgtctacatccacttgtaacaacagcttataacgctgactttgatggtgaccaa
atggcggttcacgttcctttatcaaaagaggcacaagctgaagcaagaatgttgatgtta
gcagcacaaaacatcttgaaccctaaagatggtaaaccagtagttacaccatcacaagat
atggtacttggtaactattaccttactttagaaagaaaagatgcagtaaatacaggcgca
atctttaataatacaaatgaagtattaaaagcatatgcaaatggctttgtacatttacac
acaagaattggtgtacatgcaagttcattcaacaatccaacatttactgaagaacaaaac
aaaaagattcttgctacgtcagtaggtaaaattatattcaatgaaatcattccagattca
tttgcttatattaatgaacctacgcaagaaaacttagaaagaaagacaccaaacagatac
ttcatcgatcctacaactttaggtgaaggtggattaaaagaatactttgaaaatgaagaa
ttaattgaacctttcaacaaaaaattcttaggtaatattattgcagaagtattcaacaga
tttagcatcactgatacatcaatgatgttagaccgtatgaaagacttaggattcaaattc
tcatctaaagctggtattacagtaggtgttgctgatatcgtagtattacctgataagcaa
caaatacttgatgagcatgaaaaattagtcgacagaattacaaaacaattcaatcgtggt
ttaatcactgaagaagaaagatataatgcagttgttgaaatttggacagatgcaaaagat
caaattcaaggtgaattgatgcaatcacttgataaaactaacccaatcttcatgatgagt
gattcaggtgcccgtggtaacgcatctaactttacacagttagcaggtatgcgtggattg
atggccgcaccatctggtaagattatcgaattaccaatcacatcttcattccgtgaaggt
ttaacagtacttgaatacttcatctcaactcacggtgcgcgtaaaggtcttgccgataca
gcacttaaaacagctgactcaggatatcttactcgtcgtcttgttgacgtggcacaagat
gttattgttcgtgaagaagactgtggtactgatagaggtttattagtttctgatattaaa
gaaggtacagaaatgattgaaccatttatcgaacgtattgaaggtcgttattctaaagaa
acaattcgtcatcctgaaactgatgaagttatcattcgtcctgatgaattaattacacct
gaaattgctaagaaaattacagatgctggtattgaacaaatgtatattcgctcagcattt
acttgtaacgcaagacacggtgtttgtgaaaaatgttacggtaaaaaccttgctactggt
gaaaaagttgaagttggtgaagcagttggtacaattgcagcccaatctatcggtgaacca
ggtacacagcttacaatgcgtacattccatacaggtggggtagcaggtagcgatatcaca
caaggtcttcctcgtattcaagagattttcgaagcacgtaaccctaaaggtcaagcggta
attacggaaatcgaaggtgtcgtagaagatattaaattagcaaaagatagacaacaagaa
attgttgttaaaggtgctaatgaaacaagatcatatcttgcttcaggtacttcaagaatt
attgtagaaatcggtcaaccagtacaacgtggtgaagtattaactgaaggttctattgaa
cctaagaattacttatctgttgctggattaaacgcgactgaaagctacttattaaaagaa
gtacaaaaagtttaccgtatgcaaggggtagaaatcgacgataaacacgttgaggttatg
gttcgacaaatgttacgtaaagttagaattatcgaagcaggtgatacgaagttattacca
ggttcattagttgatattcataactttacagatgcaaatagagaagcatttaaacaccgc
aagcgccctgcaacagctaaaccagtattacttggtataactaaagcatcacttgaaaca
gaaagtttcttatctgcagcatcattccaagaaacaacaagagttctaacagatgcagca
attaaaggtaagcgtgatgacttattaggtcttaaagaaaacgtaattatcggtaagcta
attccagctggtactggtatgagacgttatagcgacgtaaaatacgaaaaaacagctaaa
ccagttgcagaagttgaatctcaaactgaagtaacggaataa
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