Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_1743
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Entry
ST398NM01_1743 CDS
T02043
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ST398NM01_1743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sud03400
]
ST398NM01_1743
Enzymes [BR:
sud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ST398NM01_1743
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ST398NM01_1743
DNA repair and recombination proteins [BR:
sud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ST398NM01_1743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR_2
Deam_C
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
AFH69919
LinkDB
All DBs
Position
complement(1649601..1650473)
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
DKKLIYSDIRRFGEIRNVASVASYPSFIEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQV
ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSI
SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaagtagaacatgtaaaaagaggaattgaaccctacgttataaat
caaaaaattgaacacgttatattttctgataaagtaattgaaggtaaagctcaaggcaag
gaaacaattataaaaggaattgaattagatacttttaaaactttatcggaaggctatacc
attactaatgtagaacgaagaagtaaatatatcgtttttcagctagataataaacgagaa
caacgtacattaattagccatttaggtatggcgggtggttttttcattgtagatgaactt
gaagatattatgatacctaattatcgtaagcattggcatgttatttttgagctgtcaaat
gacaaaaagttaatttattcagatatacgtcgttttggagaaattagaaatgttgcgtct
gtagcatcttatccttcatttatagaaatagcgcctgaaccttttacaaatgaagcattg
acgtattatttaaatcgaattcatcaacagtctaataagaataaaccaatcaaacaagtg
attttggatcataaagtaatcgcaggttgcggaaatatttacgcatgtgaagcgttgttt
cgtgcaggtgttttaccagataaaaaagtaaaagacctaacacaccaacaacaagaaatg
gttttttattatgttagagaagtactagaagaaggtattaagcatggcggtacaagtatt
tcagattatcgtcatgctgatggaaaaactggtgagatgcaattgcacctcaatgtatat
aagcagccggtatgcaaagtgtgtggaagtcaaattgaaacaaaaatcatcgcgacaaga
aatagtcattattgtccagtatgtcaaaaataa
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