Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_1999
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Entry
ST398NM01_1999 CDS
T02043
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03420
Nucleotide excision repair
sud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ST398NM01_1999
03430 Mismatch repair
ST398NM01_1999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sud03400
]
ST398NM01_1999
Enzymes [BR:
sud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ST398NM01_1999
DNA repair and recombination proteins [BR:
sud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ST398NM01_1999
MMR (mismatch excision repair)
Other MMR factors
ST398NM01_1999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFH70134
LinkDB
All DBs
Position
complement(1886972..1889164)
Genome browser
AA seq
730 aa
AA seq
DB search
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQL
SRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNS
ERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSR
VLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPS
SVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVD
EVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMQEERRICYVA
ITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKR
GFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLA
QFAPIEKKED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgttattaaatcatatgaatacagagcaaagtgaagctgtaaagacaacagaa
ggaccattgttaattatggcaggtgctggttcagggaagacacgtgttttaacacataga
attgcttatttattagacgaaaaagatgtctcaccatacaatgttttggctattactttt
acaaataaagctgcaagagaaatgaaagaacgtgttcaaaaattagtaggtgatcaagca
gaagtgatttggatgtcaacattccactcaatgtgtgtgcgtattttacgtcgtgatgca
gatcgaattggtatagaacgcaattttacgataattgatcctacagaccaaaaatctgtt
attaaagacgtcttaaaaaatgaaaatattgatagtaaaaagtttgaacctcgtatgttt
atcggtgcgatcagtaatttgaaaaatgaacttaaaacacctgcagatgctcaaaaagaa
gccacagattatcactcgcaaatggtagcaacggtttatagtggatatcaacgccaattg
tcacgtaatgaagcgttagattttgatgaccttattatgacaacgattaacttatttgag
cgtgtaccagaagttctagaatattatcagaacaaattccaatatattcatgtagatgag
tatcaagataccaataaagcacaatacacattagttaaattattagcaagtaagtttaaa
aacttatgtgttgtaggtgactcagatcagtcaatttatggttggcgtggtgctgatatt
caaaatatcttatcatttgaaaaagactacccagaagcgaatacaatctttttagagcaa
aattatcgttcgacgaaaacgattttaaatgcggctaacgaagtgattaaaaataattct
gaacgtaagccaaaaggactgtggactgcaaatacgaatggtgagaaaattcattactat
gaagcaatgacagaacgtgatgaagcggaatttgtaatacgagaaattatgaagcatcaa
cgtaatggtaagaaatatcaagatatggcaattttatatagaacaaatgcacaatcacgt
gtacttgaggaaacattcatgaaatctaatatgccatacacaatggttggtggacaaaag
ttctatgaccgtaaagaaatcaaagatttattaagttatttgcgtataattgccaatagt
aatgatgacattagtttgcaacgtattattaatgttccaaaaagaggtgtaggtccttca
tctgttgaaaaagttcaaaactatgcacttcaaaacaatatcagtatgtttgatgcactt
ggagaagctgattttatcggattatcaaaaaaggtgacacaagagtgtcttaatttttac
gagttaatccaaagcttgataaaagaacaagaatttttagaaattcatgaaatagttgat
gaagtattacaaaagtctggctaccgagaaatgcttgaacgtgaaaatacactagaatct
cgaagtagattagaaaacatcgatgaatttatgtcagtaccaaaagactatgaggaaaat
accccattagaagaacagtcattaattaactttttaacggatttatcgttagtagctgat
attgatgaggcagatactgaaaatggcgtaacactaatgacgatgcactcggctaagggt
cttgaatttccaatcgtctttataatggggatggaagaatcattattcccacatattaga
gcgattaagagtgaagatgatcatgaaatgcaagaagaacgtcgtatttgttatgtagca
atcacaagggctgaagaagtgttatatatcactcatgcgacatcaagaatgttatttggt
cgccctcagtcaaatatgccatctagatttttaaaggaaattccagaatcactattagaa
aatcattcaagtggcaaacgacaaacgatacaacctaaggcaaaaccttttgctaaacgt
ggatttagtcaacgaacaacgtcaacgaaaaaacaagtatcgtcatctgattggaatgta
ggtgacaaagtgatgcataaagcctggggagaaggcatggtgagtaatgtaaacgagaaa
aatggctcaatcgaactagatattatctttaaatcacaagggccaaaacgtttgttagcg
caatttgcaccaattgaaaaaaaggaggattaa
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