Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_2122
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Entry
ST398NM01_2122 CDS
T02043
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ST398NM01_2122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sud03019
]
ST398NM01_2122
03009 Ribosome biogenesis [BR:
sud03009
]
ST398NM01_2122
Enzymes [BR:
sud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ST398NM01_2122
Messenger RNA biogenesis [BR:
sud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ST398NM01_2122
Ribosome biogenesis [BR:
sud03009
]
Prokaryotic type
rRNA helicases
ST398NM01_2122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFH70308
LinkDB
All DBs
Position
complement(2045449..2047002)
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AA seq
517 aa
AA seq
DB search
MRNKQVKRRIILQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTG
TGKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPI
ERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMD
KIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFD
TFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKND
QINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEM
DYIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSKDSESRLKRISTELLNEY
NDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDSKSKR
SKGYSSKKKSTKKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaataaacaggtaaaaaggagaattattttgcaaaattttaaagaactagggatt
tcggataatacggttcagtcacttgaatcaatgggatttaaagagccgacacctatccaa
aaagacagtatcccttatgcgttacaaggaattgatatccttgggcaagctcaaaccggt
acaggtaaaacaggagcattcggtattcctttaattgagaaagtagtagggaaacaaggg
gttcaatcgttaattttagcacctacaagagaattggcaatgcaggtagctgaacaatta
agagaatttagccgtggacaaggtgtccaagttgttactgtattcggtggtatgcctatc
gaacgccaaattaaagccttgaaaaagggcccacaaatcgtagtcggaacacctgggcgt
gttatcgaccatttaaatcgtcgcacattaaaaacggacggaattcatactttgatttta
gatgaagctgatgaaatgatgaatatgggattcatcgatgatatgagatttattatggat
aaaattccagcagtacaacgtcaaacaatgttgttctcagctacaatgcctaaagcaatc
caagctttagtacaacaatttatgaaatcaccaaaaatcattaagacaatgaataatgaa
atgtctgatccacaaatcgaagaattctatacaattgttaaagaattagagaaatttgat
acatttacaaatttcctagatgttcatcaacctgaattagcaatcgtattcggacgtaca
aaacgtcgtgttgatgaattaacaagtgctttgatttctaaaggatataaagctgaaggc
ttacatggtgatattacacaagcgaaacgtttagaagtattaaagaaatttaaaaatgac
caaattaatattttagtcgctactgatgtagcagcaagaggactagatatttctggtgtg
agtcatgtttataactttgatatacctcaagatactgaaagctatacacaccgtattggt
cgtacgggtcgtgctggtaaagaaggtatcgcggtaacatttgtaaatccaattgaaatg
gattacattagacaaattgaagatgctaatggtagaaaaatgagcgcacttcgtccacca
catcgtaaagaagtacttcaagcacgtgaagatgacatcaaagaaaaagttgaaaactgg
atgtctaaagactcagaatcacgtttgaaacgcatttctacagagttgttaaatgaatat
aacgatgttgatttagttgctgcacttttacaagagttagtagaagcgaacgatgaagtt
gaagttcaattaacttttgaaaaaccattatctcgcaaaggccgtaacggtaaaccaagc
ggttctcgtaacagaaatagtaagcgtggtaatcctaaatttgacagtaagagtaaacgt
tcaaaaggatactcaagtaagaagaaaagtacaaaaaaattcgaccgtaaagagaagagc
agcggtggaagcagacctatgaaaggtcgcacatttgctgaccatcaaaaataa
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