Staphylococcus aureus subsp. aureus ED133: SAOV_1488
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Entry
SAOV_1488 CDS
T01869
Name
(GenBank) probable ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sue
Staphylococcus aureus subsp. aureus ED133
Pathway
sue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAOV_1488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sue03019
]
SAOV_1488
03400 DNA repair and recombination proteins [BR:
sue03400
]
SAOV_1488
Enzymes [BR:
sue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAOV_1488
Messenger RNA biogenesis [BR:
sue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAOV_1488
DNA repair and recombination proteins [BR:
sue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAOV_1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADI97993
LinkDB
All DBs
Position
complement(1562951..1564330)
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AA seq
459 aa
AA seq
DB search
MLHDILRNKFGFESFKPGQQEIIESIMSQQHTLGILPTGSGKSLCYQIPTYLSGKPTLII
SPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKCLRHSRFIFLSPEFLLQPANF
KLISTIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTKHFKDAVVLALTATAPPHLQDDL
TEMLAVQFNVIKTTMNRPNISFKHLNFHDDEDKIEWLLPFLQQSGPTIIYVSSKKMCLNL
AQLIYDSGFLTGIYHGDMNYQERHTVQQQFLNNDIPIIVATSAFGMGINKKDIRTIIHFH
LSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKYILETLLFADMITEEDVQNFEIGEFLA
PDKQDVLTTLHSFYSIGALKQIFKQSFKRKQLGFFRMIGYCKLDQCRRKYLLEFFGEYPP
AQDRCCDNDSNITDIVILNKKKVIRSIGFDEKLQNLFLR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatgatattttacgaaacaaatttggtttcgagagttttaaaccgggacaacag
gaaattatagaaagtataatgtctcaacaacacactctaggtattcttccaactggaagt
ggaaagagtttgtgttatcaaatacctacttatttatcaggtaagccgacattaattatc
tcaccgttaatatctttaatggatgaccaagttatgcagttgaaaataaatggagaaaaa
cgtgtaacatgtatccactctggtatggatgaaattgagaaaaagcataatattaaatgt
ttacgacatagccgcttcatctttctaagtccagaatttctcctacaaccggcaaatttt
aaattaatttccacgatagactttggcatgattgtactagatgaagcacattgtttatct
gaatggggctacgacttcagaccacattacgcgctaataggtaaggtaactaagcatttt
aaggacgcagttgtcttggcgttgacagcaactgcaccaccacatttgcaagatgatttg
acggaaatgttagcggttcaattcaacgttattaaaactacaatgaatcgcccaaacata
agctttaagcatcttaattttcatgatgatgaggataaaattgagtggctactgccgttt
ctacaacagtcgggaccaacgattatttatgtctcatcgaaaaagatgtgtctgaattta
gcgcaacttatttatgattcaggttttcttacaggcatttatcatggtgatatgaattat
caagagcgacacacagttcaacaacaatttttaaataatgatataccgattatagtcgca
acgagtgcttttggtatgggaattaataaaaaagatattcgcacaatcattcactttcat
ctttcaacaagtccttctaactacattcaagaaattggccgtgcaggtcgcgatggtgaa
ctaagtcaggcaattagtttattccaaccggacgataaatatattttagaaacgttatta
tttgcagatatgataacagaagaagatgtacaaaatttcgaaataggagaatttttagca
cccgataaacaagacgttttgacaacgttgcattcattctatagtatcggcgccttgaaa
cagatatttaagcaatcatttaaacgaaagcaattaggattctttcgcatgattggctat
tgcaaattggatcaatgtagacggaagtatttattagaatttttcggtgaatatccaccg
gcacaagatcgatgttgtgacaatgattctaatataactgatatcgtaattttaaataag
aaaaaggtaattagaagtattgggtttgatgaaaagttgcaaaatttatttctcagatag
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