KEGG   Staphylococcus aureus subsp. aureus ED133: SAOV_2122c
Entry
SAOV_2122c        CDS       T01869                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
sue  Staphylococcus aureus subsp. aureus ED133
Pathway
sue03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sue00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAOV_2122c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sue03019]
    SAOV_2122c
   03009 Ribosome biogenesis [BR:sue03009]
    SAOV_2122c
Enzymes [BR:sue01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SAOV_2122c
Messenger RNA biogenesis [BR:sue03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SAOV_2122c
Ribosome biogenesis [BR:sue03009]
 Prokaryotic type
  rRNA helicases
   SAOV_2122c
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 AAA_19 AAA_30 Flavi_DEAD
Other DBs
NCBI-ProteinID: ADI98577
LinkDB
Position
complement(2172353..2173816)
AA seq 487 aa
MGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKVVGKQGVQSLILAPTR
ELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTL
KTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKS
PKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSA
LISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQ
DTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANGRKMSALRPPHRKEVLQARE
DDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPL
SRKGRNGKPSGSRNRNSKRGNPKFDSKSKRSKGYSSKKKSTKKFDRKEKSSGGSRPMKGR
TFADHQK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgggatttaaagagccgacacctatccaaaaagacagtatcccttatgcgttacaagga
attgatatccttgggcaagctcaaaccggtacaggtaaaacaggagcattcggtattcct
ttaattgagaaagtagtagggaaacaaggggttcaatcgttgattttagcacctacaaga
gaattggcaatgcaggtagctgaacaattaagagaatttagccgtggacaaggtgtccaa
gttgttactgtattcggtggtatgcctatcgaacgccaaattaaagccttgaaaaaaggc
ccacaaatcgtagtcggaacacctgggcgtgttatcgaccatttaaatcgtcgcacatta
aaaacggacggaattcatactttgattttagatgaagctgatgaaatgatgaatatggga
ttcatcgatgatatgagatttattatggataaaattccagcagtacaacgtcaaacaatg
ttgttctcagctacaatgcctaaagcaatccaagctttagtacaacaatttatgaaatca
ccaaaaatcattaagacaatgaataatgaaatgtctgatccacaaatcgaagaattctat
acaattgttaaagaattagagaaatttgatacatttacaaatttcctagatgttcatcaa
cctgaattagcaatcgtattcggacgtacaaaacgtcgtgttgatgaattaacaagtgct
ttgatttctaaaggatataaagctgaaggcttacatggtgatattacacaagcgaaacgt
ttagaagtattaaagaaatttaaaaatgaccaaattaatattttagtcgctactgatgta
gcagcaagaggactagatatttctggtgtgagtcatgtttataactttgatatacctcaa
gatactgaaagctatacacaccgtattggtcgtacgggtcgtgctggtaaagaaggtatc
gcggtaacatttgtaaatccaattgaaatggattacattagacaaattgaagatgctaat
ggtagaaaaatgagcgcacttcgtccaccacatcgtaaagaagtacttcaagcacgtgaa
gatgacatcaaagaaaaagttgaaaactggatgtctaaagagtcagaatcacgcttgaaa
cgcatttctacagagttgttaaatgaatataacgatgttgatttagttgctgcactttta
caagagttagtagaagcgaacgatgaagttgaagttcaattaacttttgaaaaaccatta
tctcgcaaaggccgtaacggtaaaccaagtggttctcgtaacagaaatagtaagcgtggt
aatcctaaatttgacagtaagagtaaacgttcaaaaggatactcaagtaagaagaaaagt
acaaaaaaatttgaccgtaaagagaagagcagcggtggaagcagacctatgaaaggtcgc
acatttgctgaccatcaaaaataa

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