Sphingobium fuliginis ATCC 27551: FIL70_05595
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Entry
FIL70_05595 CDS
T06343
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sufl
Sphingobium fuliginis ATCC 27551
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sufl03032
]
FIL70_05595
03036 Chromosome and associated proteins [BR:
sufl03036
]
FIL70_05595
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_05595
DNA replication proteins [BR:
sufl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIL70_05595
Chromosome and associated proteins [BR:
sufl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FIL70_05595
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FIL70_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
GTP_EFTU_D2
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
QDC36781
UniProt:
A0A5B8CJ37
LinkDB
All DBs
Position
cSF1:1197846..1198118
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AA seq
90 aa
AA seq
DB search
MNKQDLISAVAESSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcagcgcagtcgctgaaagcagcggcctttccaagagcgac
gccagcaaggccgtcgagggtgttttcgacgccatcaccggagccctgaagaagggggat
gaagttcgtctggtcggtttcggcactttctccgtttcgcagcgcaaggcctcgaccggc
cgcaacccgcgcacgggcgagacgatgacgatcaaggcttcggcccagcccaagttcaag
gccggcaagggcctgaaggactcggtcaactaa
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