Sphingobium fuliginis ATCC 27551: FIL70_05660
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Entry
FIL70_05660 CDS
T06343
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sufl
Sphingobium fuliginis ATCC 27551
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sufl03032
]
FIL70_05660
03036 Chromosome and associated proteins [BR:
sufl03036
]
FIL70_05660
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_05660
DNA replication proteins [BR:
sufl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIL70_05660
Chromosome and associated proteins [BR:
sufl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIL70_05660
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIL70_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Utp8_C
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QDC36789
UniProt:
A0A5B8CBY7
LinkDB
All DBs
Position
cSF1:complement(1210161..1210451)
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AA seq
96 aa
AA seq
DB search
MIRSELIQKLAEENPNLNLQEVERIVDLFFKEIVDRLSSGGRVELRGFGAFTTRARDART
GRNPRTGEQVPVDAKRVPYFKPGKEMRERLNGKAAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctcggaactgattcagaaattggctgaggaaaatccaaacctcaacctccag
gaagtggaaaggatcgtcgatcttttcttcaaggaaatagtcgaccgcctctccagtgga
gggcgagtggaacttcggggcttcggcgcctttacgacacgggcgcgcgacgcgcgtacc
ggccgcaatccgcgcaccggtgaacaggtgccggtggacgccaagcgggttccctatttc
aaacccggaaaggaaatgcgggaacggctgaacggcaaagctgcccactga
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