Sphingobium fuliginis ATCC 27551: FIL70_05705
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Entry
FIL70_05705 CDS
T06343
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Pathway
sufl03420
Nucleotide excision repair
sufl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIL70_05705
03430 Mismatch repair
FIL70_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_05705
Enzymes [BR:
sufl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIL70_05705
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIL70_05705
MMR (mismatch excision repair)
Other MMR factors
FIL70_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDC36796
UniProt:
A0A5B8CEX5
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All DBs
Position
cSF1:complement(1216744..1219020)
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AA seq
758 aa
AA seq
DB search
MTLPAPSPDDPAYLQGLNEPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAY
PSEILAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLAGLIDQWKNKGLTPEEIGAGESEGYANGKG
QKLYAAYQARLRDVNACDFGDLLLHVLTILKRHRDVLESYQQRFRYIMVDEYQDTNSSQY
LWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDVGEKVRIIGVWDGPEEARRVGDEIESIERSGQSLEGV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGVPLALAAARILDTDEMTPQARRSLGAFIGDLARWRD
RAVQLPHAELARQILDESGYTAMLQAERTAESAGRLENLNELTRAMEEYETLGAFLEHVS
LVMDNEAQQDERKVTIMTIHAAKGLEFDTVFLAGWEEGIFPSQRALDEGGLNSLEEERRL
AYVAITRARKSCVILHAANRRIYGQWTSSIPSRFVGELPPEHVEEESSMSGGASLWRANW
SERADPFANVQRGTGRGPGWQRAQQSGQFTREPTRIVEARASAVSLGNKGRDDMSVGLRV
FHQKFGYGTVAEIEGNKLEIDFETAGRKRVMDSFVQPA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcccgctccctcccccgacgatcccgcctatctccaggggctgaacgaaccc
cagcgggaggccgtgctcacgaccgaaggaccggtgctggtgcttgcaggcgccggcacg
ggcaagacggcggcgctcaccgctcgcctcgcccatctgatcgccacccgtcgggcctat
ccttcggaaatcctcgcagtcaccttcaccaacaaggcggcgcgcgaaatgcgggaacgc
gtcggtcggatgatcggccccgccgtcgaaggcatgccctggctgggcaccttccacgcc
atcgccgcgaagatgctgcgccgccacgccgaactggtggggctgcaatccaatttcacc
atcctcgacacggacgatcagcttcgcctgatgaagcagctcatccaggcggagggaatc
gacgagaagcgctggcccgcacgccagctcgccggcctcatcgaccagtggaagaacaag
gggctgacgccggaggaaatcggcgccggcgagagcgagggctatgccaacggaaagggg
cagaagctctacgccgcttatcaggcgcgtcttcgggacgtgaatgcctgcgatttcggg
gacttgctgctgcatgttctgacgatcctgaaacgccatcgggacgtgctggaaagctat
cagcagcgcttccgctatatcatggtggacgaatatcaggacaccaacagcagccagtat
ctgtggctgcgcctgctcgcccagcagcgcaagaacatctgctgcgtgggagacgacgac
cagtcgatctattcatggcggggggcggaagtcgccaatatcctgcggttcgaaaaggat
tttcccggcgcgaagatcgtccggctggaacagaattatcgctcgaccccccatatattg
ggcgctgcgtcaggagtgatcgcggaaaatggcaatcgcctgggcaagactctctggacc
gacatcgacgtgggcgagaaggtccgcatcatcggcgtctgggacgggccggaggaagcg
cggcgcgtgggcgacgagatcgaatcgatcgaacgcagcggccaatcgctggagggggtc
gccatcctcgtccgggcccagcaccagacgcgcgagttcgaagaccgcttcatccagatc
ggcctgccttatcgcatcgtgggcggcttccgcttctatgaacgcgccgagatccgggac
gcgctcgcctatcttcgcctggtcaatcagccggccgatgacctggcgttcgaacggatc
gtcaacgtccccaagcgcggcctgggcgacaaggccgtggaaaagctgcatcggcttgcc
cgggcggagggtgttccgcttgccctcgccgccgcgcgaatcctcgacacggacgagatg
acgccgcaggcccgccgcagccttggcgccttcatcggcgatctcgcccgctggcgggac
cgcgcggtgcaacttccccatgccgaactggcccgacagatattggacgaaagcggctac
accgccatgctccaggccgaacgcaccgccgaaagcgcgggaaggctggagaacctcaac
gaactgacccgcgccatggaggaatatgagacgctgggcgcattcctggagcatgtaagc
ctcgtcatggacaatgaggcgcaacaggacgagcgcaaggttacgatcatgaccatccac
gccgccaaggggctggagttcgacacggtcttcctcgcggggtgggaagaaggcatcttc
ccctcccagcgcgcgctcgacgaaggcggcctcaacagcctggaggaggaacgccgtctc
gcctatgtcgcgatcacgcgggcaaggaagtcctgcgtcatcctgcacgccgccaaccgc
cgcatctatggtcagtggaccagctccatcccttcgcgcttcgtcggggaattgcctccc
gaacatgtggaggaggaaagcagcatgtccggcggcgcctcgctctggcgcgccaactgg
tcggagcgggccgatcccttcgccaatgtccagcgcggcaccggtcgcggccccggatgg
cagcgcgcccaacagagcggacagttcacccgcgaacccacgcggatcgtggaggcgcgc
gcatcggcggtctcgctcggcaacaaggggcgggacgacatgagcgtcggcctgcgcgtc
ttccaccagaaattcggctacggcacggtggcggagatcgaaggcaacaagctggagatc
gatttcgaaacggcgggtcggaagcgggtgatggacagcttcgtccagcctgcctag
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