Sphingobium fuliginis ATCC 27551: FIL70_07095
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Entry
FIL70_07095 CDS
T06343
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_07095 (addB)
Enzymes [BR:
sufl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIL70_07095 (addB)
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIL70_07095 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDC37019
UniProt:
A0A5B8CCN7
LinkDB
All DBs
Position
cSF1:1504022..1506997
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AA seq
991 aa
AA seq
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MGERTRPALFNIPAHRAFSDALATGILARHGDDPMRLAQGMILLPNNRAIRSVSDAFVRK
SGGGLLLPRLVALGDPDLGEQVGGALDPLGEDDPIAPAIAPMRRQMILARMVQQASAHPV
DAGQALKLAQALGAVLDQMQVERVPMRALAELSLSDDLSQHWQTSLRLFGLLLAQWPQEL
ARLGCIDLADRRNRLLDRMTERWTKAPPEGFVIAAGMSTTAPAVAMLLRRIAMLPQGAVV
FAGLDQEMDGDAWDAIGPFDADPLTGRAPAGHETHPQYALKRLLDRMSVTRDDVALWRWG
SEHDARAVRGRNISNAMLPPRLTSRWRDLRTADRSLAGVEALEVATPGEEAQAIAIALRE
AVETPGRTAALVTPDRQLATRVSAHLRRWGMEADDSAGQPLSRLPPGTLLIAMAEALAER
FAPVALLTLLKHPLVMRGEGRLAWLEGVRGLDLLLRGPRPRAGIHGIDLLLAEREGEDRQ
SALRARTRQWWGEARALLEPLEQAFMAAPDLAGQLAAIREHAGRLSHDAVWAGHQGHAAA
DLFAEMEEAASEGPRQADIRALPALFDHLLGGLSVRPPQGGHPRISILGLIEARLVQTDL
MILGGLNEGTWPGLPAPDPWLAPRIRREIGLPGLESRIGLAAHDFASALGAPQVLITRAR
RGAGGPAVASRFWLRLKAMAGPQWKSADRYAALAQAIDHAEEHRPARRPAPAPPSSVRPK
VIPVTDVDRLKADPYAFYAKRILRLARLDPVDADAGPAWRGTAVHEILQRWAEEGDGDLA
DLEARARAMFDRPDVHPLLKALWQPRLIEAIRWIAAEVASDLAAGRKILSVETEGRAEIA
GVTLTGKADRIDLLPDGRLGIVDYKTGKPPSARQVKAGYALQLGLLGLIAEHGGFPGTDS
APVAGSFEYWSLAKKGDAFGYRESPVDPLGKRDKIVTADFTSQVHAQFEEIAAAWLNGSA
PFDAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacgcacccgcccggcgctgttcaacatacccgcgcaccgcgccttttccgac
gcgctggcgacgggcatcctcgcccggcatggcgatgatccgatgcggctggcgcagggc
atgatcctgctgcccaacaaccgcgccatccggtcggtcagcgatgccttcgtccgcaag
tcgggcggtggcctgctgttgccgcgcctcgtcgcgctgggtgatcccgatctgggcgaa
caggtgggcggcgcgctcgatccgttgggggaggatgaccccatagcgcccgccatcgcg
ccgatgcgccgccagatgatcctggcgcgcatggtgcaacaggcatcggcgcaccccgtc
gatgcgggccaggcgttgaagctggcccaggcgctgggcgcggtcctcgaccagatgcag
gtggagcgcgttcccatgcgcgcgctggcggaactcagcctgtcggacgatctgtcgcag
cattggcagacctcgctgaggctgttcggcctgttgctggcgcaatggccgcaggagctg
gcgcggctggggtgcatcgacctcgcggaccgccgcaatcgcctgctggaccgcatgacg
gagcgctggaccaaggcgccgccggagggtttcgtcatcgcggcgggcatgtccaccacg
gcgccggcagtggccatgctgctccggcggatcgcgatgctgccgcagggagcggtggtc
tttgccggtctggatcaggagatggacggcgatgcctgggacgccatcggccccttcgat
gccgaccctctgaccggccgcgcacctgccgggcatgagacccatccccaatatgctctg
aaacgcctgctcgaccggatgagcgtgacgcgcgacgatgtggcgctctggcgctggggc
agcgagcatgacgcccgcgccgtccgggggcgcaacatctccaacgccatgctgccgccg
cgcctgacgagccgctggcgcgatctcaggaccgcagaccgttcgctcgccggggtggag
gcgctggaagtcgcgacgccgggcgaagaggcgcaggcgatcgccatcgccctgcgcgaa
gcggtcgagacgccgggccgcaccgccgcgctggtgacgcctgaccggcaattggcgacc
cgcgtgtccgcgcatctgcgccgctggggcatggaggcggacgattcggcgggtcagccg
ctgtcgcgcctgccgcccggaacgctgctgatcgccatggccgaggcgctggcggagcgc
tttgcccccgtcgcgctgctgaccctgctcaagcatccgctcgtcatgcggggggaaggg
cggcttgcctggctggagggcgtgcgcgggctagacctgttgctgcgcggaccaaggccg
cgggcgggcatccatgggatcgacctgttgctggccgaacgggagggcgaagaccggcaa
agcgccttgcgcgcccgcacgcggcagtggtggggcgaagcccgcgcgctgctggaaccg
ctggagcaggccttcatggccgcgccggaccttgccgggcagttggcggccatccgggaa
catgccggccgtctctcccatgatgcggtctgggccgggcatcagggtcatgccgccgcc
gaccttttcgctgagatggaggaggcggcgagcgaagggccgcgtcaggccgacatacgc
gcgctgcctgccctgttcgaccatcttctgggcggcctttcggttcgcccgccgcagggc
ggccacccccggatcagcatcctcggcctgatcgaagcgcggctggtgcagacagacctc
atgatattgggcggcctcaacgagggcacatggccggggctgcccgcgcccgatccatgg
ctcgccccgcgcatccgccgggaaatcgggctgcccggcctggaaagccgcatcggcctt
gccgcccatgatttcgccagcgcccttggcgcgccgcaggtgctgatcacgcgcgcccgg
cgcggcgcgggcggtccggcggtcgcctcccgcttctggctgcggctgaaggctatggcg
gggccgcaatggaagagcgccgaccgctatgccgctctggcgcaggcgatcgaccatgcg
gaggagcacaggcccgcccgacgccccgcgccggcgccgccttcgtcagtgcgtccgaag
gtcattccggtcactgacgtcgaccggctgaaggccgatccctacgccttctatgccaag
cgcatcctgcgactggcgcggctcgacccggtggacgccgatgccggacccgcctggcgc
ggcacggccgtgcatgagatcctccagcgatgggcggaggagggcgacggcgatctggcc
gatctggaagcgcgcgcgcgggcgatgttcgaccggccggacgtccaccccttgctcaag
gcgctctggcaaccgcgccttatcgaagcgatacgatggatcgcggcggaggtggcgagc
gatcttgccgccgggcggaagatcctttcggtggaaacggaggggcgggcggagattgcc
ggggtgacgctgaccggaaaggccgaccgcatcgacctgctgccggacgggaggctgggc
atagtcgactacaagaccggcaagccgcccagcgcgcggcaggtgaaggcgggctatgcg
ctgcaactcggcctgctgggcctgatcgcggagcatggcggctttcccggcaccgattcc
gcacccgtggcgggcagtttcgaatattggtcgctcgcgaagaagggcgacgcattcggc
tatcgcgaaagcccggtcgacccgctgggcaagcgggacaagatcgtcaccgccgacttc
acctcccaggttcatgcgcagttcgaggaaatcgccgccgcctggctcaatggatcggcg
cccttcgatgcgcaggtgaacccggaagtcgccaattatggcgattatgaccagctcatg
cggctggaggaatggtatggccgggacgatggctag
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