Sphingobium fuliginis ATCC 27551: FIL70_09965
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Entry
FIL70_09965 CDS
T06343
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sufl
Sphingobium fuliginis ATCC 27551
Pathway
sufl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FIL70_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_09965
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FIL70_09965
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QDC37495
UniProt:
A0A5B8CF16
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Position
cSF1:complement(2087839..2088741)
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AA seq
300 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHQPSGKRVRYEKTVPGLGPVDPE
DIVKGYELSKGDYVLLQPDEIDAVKLESKKTLELTQFVDASEIDVLYYERPYYVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYIVSLKPCGRGMVLETLRYADEVNRAQSYFR
DIEDAKPDAELLDLAETLIEKKTAPFKPDSFHDRYVDALERLIEKKKKSKGRRVIEEEEE
GAAPRGSNVIDLMAALKKSVGSGAASSAAKPAAKKAPAAKAPAKATTRKTPAKPASRKRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgcgcatattggcaggggcagattcgtctggcgctggtatccattccggtg
gagatctatgccgccaccaagtccggcgcgcagatcgccttccaccagatacaccagccc
agcggcaagcgcgtccgttatgaaaagaccgttccgggcctgggtccggtcgatccggag
gacatcgtcaagggctatgagctgtccaagggcgactatgtgctgctccagcccgacgag
atcgacgcggtgaagctggagagcaagaagacgctcgaactcacccagttcgtcgacgcc
agcgagatcgatgtcctctattatgagcggccctattatgtcgtgcccgcggacgatctg
gcggaggaagccttcatcgtcctgcgggaggcgctgcggcggacgaagaaggtcgggctg
ggccagcttgccatgcggggccgggaatatatcgtctcgctgaagccttgcggccggggc
atggttctggaaacgctgcgctatgccgatgaggtgaaccgcgcccagagctatttccgc
gacatagaggatgcgaagcccgatgcggagctgctcgaccttgccgagacgctgatcgag
aagaagaccgcgcccttcaagcccgacagcttccacgaccgctatgtggacgcgctggaa
aggctgatcgaaaagaagaagaagtcgaagggccgccgcgtcatcgaagaggaagaggag
ggcgcggctccgcgcggcagcaatgtgatcgacctgatggcggcgctcaagaagtcggtc
ggttccggcgcggcttcttccgccgcgaaaccggcggcgaagaaggcgcctgccgccaag
gcgcccgccaaggccacgacgcgaaagacccccgccaagccggccagccgaaaacgggcc
tga
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