Sphingobium fuliginis ATCC 27551: FIL70_16910
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Entry
FIL70_16910 CDS
T06343
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Pathway
sufl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIL70_16910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sufl03021
]
FIL70_16910
03400 DNA repair and recombination proteins [BR:
sufl03400
]
FIL70_16910
Enzymes [BR:
sufl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIL70_16910
Transcription machinery [BR:
sufl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIL70_16910
DNA repair and recombination proteins [BR:
sufl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIL70_16910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
QDC38674
UniProt:
A0A5B8CGC9
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All DBs
Position
cSF1:complement(3500955..3502019)
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AA seq
354 aa
AA seq
DB search
MTVNMKNWQELKKPNSLEIKVAGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALKMEGDGPRRLQLSATGPAEVRAGDI
TTVGDIEVMNPDLVICHLDQGATLNMELTADVGKGYVPAVANRPTDAPIGLIPVDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
VAAPAAGAAAGGSASEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacagccttgagatcaag
gtcgcgggcgacggcaagcgcaaggcgaccttcgtcgccgaacctctggagcgcggcttc
ggcctgacgcttggcaacgcgctgcgccgggttcttctgtcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctccacgaattctcctcgctcgcgggcgtgcgt
gaggacgtcacggacatcgtcctcaacatcaagcaggttgcgctgaaaatggaaggcgac
ggtccacgccgtctccagctttccgccaccggccccgccgaagtgcgcgcgggcgacatc
accaccgtgggcgacatcgaagtgatgaaccccgacctggtgatctgccacctggaccag
ggcgcgacgctgaacatggaactgaccgccgacgtcggcaagggctatgtccccgccgtc
gccaaccgtccgaccgacgccccgatcggcctgatcccggtcgacgcgctctattcgccg
gtgcgtcaggtcgcctacaaggtcgacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgaccgtcgagaccgacggcaccgtcacgccggaagacgcggtggcctat
gccgcccgcatcctgcaggaccagctccagctgttcgtccacttcgaggacgcgctgccc
gtcgccgctccggccgccggcgccgctgccggcggttcggccagcgagggcgagagcgac
gcgaaccagatcaaccgctacctgctcaagaaggtggacgagctggaactgtcggtccgc
agcgccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagacc
gaggccgagatgctgcgcacccccaatttcggccgcaagtcgctgaacgagatcaaggaa
gtgctgtcgtccatgggcctgcgcctgggcatggacatccccggctggccgccggaaaat
atcgaggaaatggccaagaagctcgaacaggagctgctgggctga
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