Sphingobium fuliginis ATCC 27551: FIL70_18310
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Entry
FIL70_18310 CDS
T06343
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sufl03016
]
FIL70_18310
Enzymes [BR:
sufl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FIL70_18310
Transfer RNA biogenesis [BR:
sufl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FIL70_18310
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QDC38908
UniProt:
A0A5B8CH88
LinkDB
All DBs
Position
cSF1:3770323..3770877
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AA seq
184 aa
AA seq
DB search
MENQPGKTLFRLFFALKPTLLIARQTDHFAEAIAGGARRIAVDHQHVTLAITCDYVEYPY
AVIKALMRAGTGVMAEPFDLRLDRLSIGNRSAALRPSHSVPLLGTLQKQIAAGMKGAGVM
LRPGWSFSPHQTLFYRDGQPEQRRVDGFGWHVDRFMLICSHVGRTHHETLATWTLKGSGQ
YSLF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagcccggcaagaccctcttccgcctgttcttcgccctgaagcccacattg
ctgatcgcccgccagacggatcatttcgcggaggccatcgccggcggcgcccggcgcatc
gccgtggatcaccagcatgtgacgctggcgatcacctgcgattatgtcgaatatccctat
gcggtgatcaaggcgctgatgcgcgccgggacgggcgtgatggcggaaccgttcgacctg
cggctggaccggctcagcatcggcaaccggtccgccgccctgcgtccgtcccatagcgtg
ccgttgctcggtacgcttcagaagcagatcgcggcgggcatgaaaggcgcgggggtgatg
ctgcgtcccggctggagcttcagcccgcaccagacgctgttctatcgcgacggccagccg
gaacagcgtcgggtcgatggctttggctggcatgtcgaccggttcatgctgatatgcagc
catgtcgggcgcacgcatcatgagaccctggccacctggactctgaaaggaagtgggcag
tacagccttttttaa
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