Staphylococcus aureus subsp. aureus ST398 (MRSA): SAPIG0618
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Entry
SAPIG0618 CDS
T02071
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sug
Staphylococcus aureus subsp. aureus ST398 (MRSA)
Pathway
sug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAPIG0618 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sug03021
]
SAPIG0618 (rpoC)
03400 DNA repair and recombination proteins [BR:
sug03400
]
SAPIG0618 (rpoC)
Enzymes [BR:
sug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAPIG0618 (rpoC)
Transcription machinery [BR:
sug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAPIG0618 (rpoC)
DNA repair and recombination proteins [BR:
sug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAPIG0618 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CAQ49046
LinkDB
All DBs
Position
646087..649710
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIKDLLE
EIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLHTRIGVH
ASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPNRYFIDPTT
LGEGGLKEYFENEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVADIVVLPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKDQIQGEL
MQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDEVIIRPDELITPEIAKKITDAGIEQMYIRSAFTCNARH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQ
PVQRGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVE
SQTEVTE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggattggcttcacctgaaaaaatc
cgttcttggtcttttggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
cctgaaaaagatggtctattctgtgaaagaattttcggacctacaaaagactgggaatgt
agttgtggtaaatacaaacgtgttcgctacaaaggcatggtctgtgacagatgtggagtt
gaagtaactaaatctaaagtacgtcgtgaaagaatgggacacattgaacttgctgctcca
gtttctcacatttggtatttcaaaggtataccaagtcgtatgggattattacttgacatg
tcaccaagagcattagaagaagttatttactttgcttcttatgttgttgtagatccaggt
ccaactggtttagaaaagaaaactttattatctgaagctgaattcagagattattatgat
aaatacccaggtcaattcgttgcaaaaatgggtgcagaaggtattaaagatttacttgaa
gagattgatcttgacgaagaacttaaattgttacgcgatgagttggaatcagctactggt
caaagacttactcgtgcaattaaacgtttagaagttgttgaatcattccgtaattcaggt
aacaaaccttcatggatgattttagatgtacttccaatcatcccaccagaaattcgtcca
atggttcaattagatggtggacgatttgcaacaagtgacttaaacgatttataccgtcgt
gtaattaatcgaaacaatcgtttgaaacgtttattagatttaggtgcacctggtatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgttgacgctttaattgataatggtcgt
cgtggtcgtccagttactggcccaggtaaccgtccattaaaatctttatctcatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattcagga
cgttcagttatcgcggtaggtccaagcttgaaaatgtaccaatgtggtttaccaaaagaa
atggcacttgaactgtttaaaccattcgtaatgaaagaattagttcaacgtgaaattgca
actaacattaaaaatgcgaagagtaaaatcgaacgcatggatgatgaagtttgggacgta
ttggaagaagtaattagagaacatcctgtattacttaaccgtgcaccaacacttcataga
cttggtattcaagcatttgaaccaactttagttgaaggtcgtgcgattcgtctacatcca
cttgtaacaacagcttataacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatcaaaagaggcacaagctgaagcaagaatgttgatgttagcagcacaaaacatcttg
aaccctaaagatggtaaaccagtagttacaccatcacaagatatggtacttggtaactat
taccttactttagaaagaaaagatgcagtaaatacaggcgcaatctttaataatacaaat
gaagtattaaaagcatatgcaaatggctttgtacatttacacacaagaattggtgtacat
gcaagttcattcaacaatccaacatttactgaagaacaaaacaaaaagattcttgctacg
tcagtaggtaaaattatattcaatgaaatcattccagattcatttgcttatattaatgaa
cctacgcaagaaaacttagaaagaaagacaccaaacagatacttcatcgatcctacaact
ttaggtgaaggtggattaaaagaatactttgaaaatgaagaattaattgaacctttcaac
aaaaaattcttaggtaatattattgcagaagtattcaacagatttagcatcactgataca
tcaatgatgttagaccgtatgaaagacttaggattcaaattctcatctaaagctggtatt
acagtaggtgttgctgatatcgtagtattacctgataagcaacaaatacttgatgagcat
gaaaaattagtcgacagaattacaaaacaattcaatcgtggtttaatcactgaagaagaa
agatataatgcagttgttgaaatttggacagatgcaaaagatcaaattcaaggtgaattg
atgcaatcacttgataaaactaacccaatcttcatgatgagtgattcaggtgcccgtggt
aacgcatctaactttacacagttagcaggtatgcgtggattgatggccgcaccatctggt
aagattatcgaattaccaatcacatcttcattccgtgaaggtttaacagtacttgaatac
ttcatctcaactcacggtgcgcgtaaaggtcttgccgatacagcacttaaaacagctgac
tcaggatatcttactcgtcgtcttgttgacgtggcacaagatgttattgttcgtgaagaa
gactgtggtactgatagaggtttattagtttctgatattaaagaaggtacagaaatgatt
gaaccatttatcgaacgtattgaaggtcgttattctaaagaaacaattcgtcatcctgaa
actgatgaagttatcattcgtcctgatgaattaattacacctgaaattgctaagaaaatt
acagatgctggtattgaacaaatgtatattcgctcagcatttacttgtaacgcaagacac
ggtgtttgtgaaaaatgttacggtaaaaaccttgctactggtgaaaaagttgaagttggt
gaagcagttggtacaattgcagcccaatctatcggtgaaccaggtacacagcttacaatg
cgtacattccatacaggtggggtagcaggtagcgatatcacacaaggtcttcctcgtatt
caagagattttcgaagcacgtaaccctaaaggtcaagcggtaattacggaaatcgaaggt
gtcgtagaagatattaaattagcaaaagatagacaacaagaaattgttgttaaaggtgct
aatgaaacaagatcatatcttgcttcaggtacttcaagaattattgtagaaatcggtcaa
ccagtacaacgtggtgaagtattaactgaaggttctattgaacctaagaattacttatct
gttgctggattaaacgcgactgaaagctacttattaaaagaagtacaaaaagtttaccgt
atgcaaggggtagaaatcgacgataaacacgttgaggttatggttcgacaaatgttacgt
aaagttagaattatcgaagcaggtgatacgaagttattaccaggttcattagttgatatt
cataactttacagatgcaaatagagaagcatttaaacaccgcaagcgccctgcaacagct
aaaccagtattacttggtataactaaagcatcacttgaaacagaaagtttcttatctgca
gcatcattccaagaaacaacaagagttctaacagatgcagcaattaaaggtaagcgtgat
gacttattaggtcttaaagaaaacgtaattatcggtaagctaattccagctggtactggt
atgagacgttatagcgacgtaaaatacgaaaaaacagctaaaccagttgcagaagttgaa
tctcaaactgaagtaacggaataa
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integrated database retrieval system
