Staphylococcus aureus subsp. aureus ST398 (MRSA): SAPIG2163
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Entry
SAPIG2163 CDS
T02071
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sug
Staphylococcus aureus subsp. aureus ST398 (MRSA)
Pathway
sug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIG2163 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sug03021
]
SAPIG2163 (rho)
03019 Messenger RNA biogenesis [BR:
sug03019
]
SAPIG2163 (rho)
Transcription machinery [BR:
sug03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SAPIG2163 (rho)
Messenger RNA biogenesis [BR:
sug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAPIG2163 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
Mor
Spore_III_AA
AAA_25
AAA
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
CAQ50549
LinkDB
All DBs
Position
complement(2238991..2240307)
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETETQNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKKSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaattgtacaagaac
tatactaccaaggaactcactcaaaaagctaaaactcttaagttgacgaactatagtaaa
ttaaataaaaaagaacttgttctagctattatggaagcacaaatggaaaaagatggtaac
tattatatggaaggtatcttagatgatatacaaccagatggttatggttttttaagaaca
gtgaactattctaaaggggaaaaagatatttatatatctgctagccaaattcgtcgtttt
gaaattaaacgtggggataaagtaactgggaaagttagaaaacctaaagataacgaaaaa
tattatggcttattacaagttgactttgtcaatgaccataacgcagaagaagtgaagaaa
cgaccgcatttccaagctttgacaccactttatccagatgagcgtattaaattagagaca
gaaacacaaaattattcaacgcgcatcatggatttagtaacaccgattggtttaggtcaa
cgtggtttaatagtggcgccacctaaagcaggtaaaacatcgttattaaaagaaatagcg
aatgcaatcagtacgaacaaaccagatgcaaaattatttattttactagttggcgaacgt
cctgaagaggtaacggatttagaacgttcagtagaggctgctgaagttgtgcattctaca
tttgacgaaccaccagaacatcatgttaaagtagctgaattattacttgaacgtgcaaaa
cgcttagtagaaattggtgaagatgtcattattttaatggactctataacaagattagca
cgcgcttataacttggttattccaccaagtggtcgtacgttgtcaggtggcttggatcca
gcttcgttacacaaaccaaaagcattctttggtgctgcgagaaacattgaagcgggtgga
agtttaactattctagcaacggcattagttgatacgggttcacgtatggacgacatgatt
tacgaagagtttaaagggacaggaaatatggaattacatttagatcgcaaattatctgaa
cgccgtattttccctgctattgatattggcagaagctcaacacgtaaagaagaattgttg
attagtaaatcggaattagatacattatggcaattgagaaatctatttacagattcaacg
gacttcactgaaagatttattcgtaaacttaaaaaatctaagaataacgaagacttcttt
aaacagttacaaaagtctgcagaagaaagtactaaaacaggtcgacctataatttaa
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