Staphylococcus argenteus: SAMSHR1132_04870
Help
Entry
SAMSHR1132_04870 CDS
T01767
Name
(GenBank) DNA-directed RNA polymerase beta' chain protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
suh
Staphylococcus argenteus
Pathway
suh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
suh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAMSHR1132_04870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suh03021
]
SAMSHR1132_04870
03400 DNA repair and recombination proteins [BR:
suh03400
]
SAMSHR1132_04870
Enzymes [BR:
suh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAMSHR1132_04870
Transcription machinery [BR:
suh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAMSHR1132_04870
DNA repair and recombination proteins [BR:
suh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAMSHR1132_04870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCE58344
LinkDB
All DBs
Position
562175..565798
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFREYYDKYPGQFVAKMGAEGIKDLLE
EIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLHTRIGVH
ASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPDRYFIDPTT
LGEGGLKEYFDKEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVADIVVLPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKDQIQGEL
MQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDEVIIRPDELITPEIAKKITDAGIEQMYIRSAFTCNARH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQ
PVQRGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVE
TQTEVTE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggcttagcttcacctgaaaaaatc
cgctcatggtcatttggtgaggttaaaaaacctgaaacaatcaactaccgtacattaaaa
cctgaaaaagatggtctattctgtgaaagaattttcggacctacaaaagactgggaatgt
agttgtggtaaatacaaacgtgttcgctacaaaggcatggtctgtgacagatgtggtgtt
gaagtaactaaatctaaagtacgtcgtgaaagaatgggacacattgaacttgctgctcca
gtttcacacatttggtatttcaaagggattccaagtcgtatgggattgttgcttgatatg
tcaccaagagcattagaagaagttatttactttgcttcttatgttgttgtagatccaggt
ccaactggcttagaaaagaaaactttattatctgaagctgaattcagagaatactatgat
aaataccctggtcaatttgttgctaaaatgggtgcagaaggtatcaaagatttacttgaa
gagattgatctagacgaagaacttaaattattgcgtgacgagttagaatcagctactgga
caaagacttactcgtgcaattaaacgtttagaagttgttgaatcattccgtaactcaggt
aataaaccttcatggatgattttagacgtacttccaatcatcccgccagaaattcgtcca
atggttcaattagatggaggacgtttcgcaacaagtgacttaaatgatttataccgtcgt
gtaataaaccgaaataatcgtttaaaacgtttattagatttaggtgcacctggtattatc
gttcaaaatgaaaaacgtatgttacaagaagcagttgatgctttaattgacaatggtcgt
cgtggacgtccagttactggtccaggtaaccgtccgttgaaatctttatcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaagcgtgttgactattcaggt
cgttcggttatcgctgtaggtccaagcttaaaaatgtatcaatgtggtttacctaaagaa
atggcacttgagctatttaaaccttttgttatgaaagaattagttcaacgtgaaattgct
actaacattaaaaatgctaagagtaaaatcgaacgcatggatgacgaagtatgggatgtt
ttagaagaagtgattagagaacacccagttttacttaaccgtgcgccaacacttcacaga
ttaggtattcaagcatttgaaccgacattagttgaaggtcgtgcaattcgtcttcatcca
cttgtaacaacagcttataatgctgactttgatggtgaccaaatggctgttcacgttccg
ttatcaaaagaagctcaagctgaagcaagaatgttaatgttagctgcacaaaacatcttg
aatcctaaagatggtaaaccagtagtaacaccatctcaggatatggtacttggtaactat
taccttactttagaaagaaaagatgcagtaaatacaggtgcaatctttaataatacaaat
gaagtattaaaagcatatgcaaatggatttgttcatttacacacaagaattggtgtacat
gcaagctcatttaacaatcctacatttactgaagaacaaaacaaaaagattcttgctact
tcagtaggtaaaattattttcaatgaaattattccagattcattcgcttatataaatgaa
cctacgcaagaaaacttagaaagaaaaacacctgatagatatttcatcgatcctacgaca
ttaggagaaggtggcttaaaagaatactttgacaaagaagagttaattgaaccattcaat
aaaaaattcttaggtaatatcattgccgaagtattcaatagatttagtatcactgataca
tcaatgatgttagaccgtatgaaagacttaggtttcaaattctcatctaaagctggtatt
acagtaggtgttgctgatatcgttgtattacctgataagcaacaaatccttgatgaacat
gaaaaactagtcgacagaattacaaaacaattcaatcgtggtttaatcactgaagaagaa
agatataatgcagttgttgaaatttggacagatgcaaaagatcaaatacaaggtgaattg
atgcaatcacttgataaaacaaacccaatcttcatgatgagtgattcaggtgcccgtggt
aacgcttctaactttacacaattagctggtatgcgtggtttaatggctgcgccatcaggt
aaaattatcgagttaccaattacatcttcattccgtgaaggtttaacagtacttgagtac
ttcatctcaactcacggtgcgcgtaaaggtcttgccgatacagcacttaaaacagctgac
tcaggatatcttactcgtcgtcttgttgacgtggcacaagatgttattgttcgtgaagaa
gactgtggtacagatagaggtttattagtttctgatattaaagaaggtacagaaatgatt
gagccatttatcgaacgtatcgaaggtcgttattctaaagaaacaattcgtcatcctgaa
actgatgaagtaatcattcgtcctgacgaattaattacacctgaaatcgctaagaaaatt
acagatgctggcatcgaacaaatgtatatccgttcagcctttacatgtaatgcgagacac
ggtgtttgtgaaaaatgttacggtaaaaaccttgcgactggtgaaaaggttgaagttggt
gaagcagttggtacaatcgctgcacaatcaattggtgaaccaggtacgcagcttacaatg
cgtacattccatacaggtggggtagccggtagcgatatcactcaaggtcttcctcgtatc
caagaaattttcgaagcacgtaaccctaaaggtcaagcagtgattacggaaatcgaaggg
gtagttgaagatattaaattagcaaaagatagacaacaagaaattgttgtaaaaggtgct
aatgaaacaagatcatacctagcttcaggtacttcaagaattattgtagaaatcggtcaa
ccagtacaacgtggtgaagtattaactgaaggttctattgaacctaagaattacttatca
gttgctggattaaatgctactgaaagctacttattaaaagaagtacaaaaagtttaccgt
atgcaaggggtagaaatcgacgacaaacacgtcgaggttatggttagacaaatgttacgt
aaagtaagaattattgaagcaggtgatacgaagttattaccaggttcattagtagatatt
cataactttacagatgcaaacagagaagcatttaaacaccgtaagcgtccagcaacagct
aaaccagtattactaggtattacgaaagcatcacttgaaacagaaagtttcttatctgca
gcatcattccaagaaacaactagagtacttacagatgcagcgattaaaggtaaacgtgat
gacttactaggtcttaaagaaaacgtaattattggtaaattaattccagcaggtactggt
atgagacgttatagtgacgttaaatacgaaaagactgctaaaccagttgctgaagttgaa
actcaaacagaagtgactgaataa
DBGET
integrated database retrieval system
