Staphylococcus argenteus: SAMSHR1132_06660
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Entry
SAMSHR1132_06660 CDS
T01767
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suh
Staphylococcus argenteus
Pathway
suh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMSHR1132_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suh03019
]
SAMSHR1132_06660
03400 DNA repair and recombination proteins [BR:
suh03400
]
SAMSHR1132_06660
Enzymes [BR:
suh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMSHR1132_06660
Messenger RNA biogenesis [BR:
suh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMSHR1132_06660
DNA repair and recombination proteins [BR:
suh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMSHR1132_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
DUF1033
Motif
Other DBs
NCBI-ProteinID:
CCE58521
LinkDB
All DBs
Position
753784..755565
Genome browser
AA seq
593 aa
AA seq
DB search
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLMLGGTTIVI
SPLISLMKDQVDQLKAMGIQAAFLNSSLSQKEQQRIEKELSNGEIQFLYVAPERFENRYF
LNLLQRIKIHLIAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQ
DIREKLNIAQTDQVKTSTKRRNLIFKVNPTYQRQKYVIDYIKSHDEDAGIVYCSTRKQVE
ELKEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLT
KMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQ
QESYSVIIQVLRGETTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEI
LMCDTSIKKLLSNKVEVFTTPFKQKATEKVFINTVEGVDRALFSQLVEVRKKLSDKLTIA
PVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaaactttatcgcattactttggatatgaaacgtttcgtccaggacaagaa
gaaattataagtaaagtgctcgaccatcgtaatgtgcttggtgtcttaccaacaggtggt
ggtaagtcgatatgctatcaagtaccaggtttgatgttaggcggtacaacgatagttata
agtcctttgatttcattaatgaaagatcaagtggatcaattaaaagcgatgggtatacaa
gctgcttttcttaatagcagtttgtcacaaaaagaacaacaacgtattgaaaaagaatta
tcgaatggtgaaattcaatttttatacgtagcaccagagcgatttgaaaatcgatatttt
ttaaatttacttcaacgtatcaaaatacatttaattgcatttgatgaagcccattgtatt
tccaagtggggacatgatttcagaccaagttatcaaaatgttatttctaaagtatttact
ttacctcaagattttacaattattgcgttaaccgcaacggcaactgttgaagttcaacaa
gatattagagaaaagttaaatattgctcaaactgatcaagtaaaaacaagtacgaaacgt
agaaatttgatttttaaagttaaccctacgtatcaacgtcaaaaatatgtcattgattac
attaaatctcacgatgaagatgcaggcatcgtttattgttcgacacgtaaacaggttgaa
gaacttaaagaagctttagaaagtcaaaagatagaaagtgttatatatcatgcaggttta
agtaataaagagcgtgaggaagcacaaaacgacttcttatttgatcgtgtgaaggtagtt
gttgcaacaaatgcttttggtatgggaattgacaaatcaaatgttcgttttgttattcat
tataatatgcctggtgatttagagtcgtattatcaagaagcaggacgtgcgggtcgtgat
ggcttgaaaagtgaatgtattttactatttagcgaacgtgatatcaatttgcacgaatat
tttataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaaattaact
aaaatgattcaatatactaaaacgaaaaagtgtttagaagcaacaatagttcattatttt
gaaccgaatgagaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaa
tcatataatatgactcaagaagcaaagatgattattagttgtattgcgcgtatgaaacaa
caggaaagctatagtgtaatcattcaggtgcttagaggtgaaacgaccgattatattaag
tataaaggttatgaccaaatttcaacccatggattaatgaaaggttacacaacatcggaa
ttaagtcatttaattgatgaactaaggtttaaaggatttttaaatgaaaatgatgaaata
ttaatgtgtgacacatcaattaaaaaattacttagtaataaggtagaagtttttactaca
ccatttaaacaaaaagcaactgaaaaagtatttattaatacagttgaaggtgttgatcgt
gctttattcagtcaattagtggaagttcgtaaaaaattaagcgacaaattaaccattgca
cctgtaagtattttttcggattatacactagaagaatttgctaaacgtaaacctgcttcg
aagcaagatatgattaatattgatggtgttggtagttataagctaaaacactattgccca
gcatttttagaaacaatccaaaattataaagcaaaagtatga
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