Staphylococcus argenteus: SAMSHR1132_09360
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Entry
SAMSHR1132_09360 CDS
T01767
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
suh
Staphylococcus argenteus
Pathway
suh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMSHR1132_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suh03019
]
SAMSHR1132_09360
Messenger RNA biogenesis [BR:
suh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMSHR1132_09360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4152
Motif
Other DBs
NCBI-ProteinID:
CCE58789
UniProt:
A0A7U7JTW8
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All DBs
Position
complement(1044999..1046696)
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AA seq
565 aa
AA seq
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MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
EQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLH
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKIVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPDDTVVFSSSPIPGNTKSINRTINALYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKMLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLY
EKTARKPMILPVIMKVNEQKETKNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgctcttggaggtctaggtgaaatc
ggtaaaaatacttatgcagtagagtataaagacgaaatcgtcattatcgatgcaggtatt
aaattccctgatgacaacttattaggtattgactacgtcattcccgactacacttaccta
gaacaaaaccaagataaaattgttggcctatttattacgcatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatatacggcggtccattagca
ttaggtttaatccgtaataaacttgaagaacatcacttattacgcacagctaaattacac
gaaataaatgaagatagtgttatcaaatctaagcatttcacaatttcattctatttaact
acacacagtattcctgaaacatatggtgtaatagttgatacacctgaaggaaaaattgtc
catactggtgactttaaattcgattttactccagttggtaaaccagcaaacattgcaaaa
atggctcaattaggtgaagaaggcgtattatgtttactttccgactccacaaattcactt
gtaccagattttactttaagtgaacgtgaagttggtcaaaacgtagataaaatcttccgt
aattgtaaaggtagaattattttcgctacttttgcatctaatatttatcgagttcagcaa
gctgttgaagcagcaattaaaaacaaccgtaaaattgttacattcggtcgttcaatggag
aacaatattaaaatcggtatggaacttggatatattaaagcaccacccgaaacatttatt
gaaccaaataaaattaatactgtacctaaacatgagttattaattttatgtactggttct
caaggtgaaccaatggctgcattatcgcgaatcgctaatggtacgcataaacaaattaaa
attattccagatgatacagttgtatttagttcatcacctattccaggtaatactaagagt
attaatagaacaataaatgcactatataaagctggtgctgatgttattcatagtaagatt
tctaatatccatacttcaggtcacggctctcaaggtgatcaacagttgatgttacgtctg
atcaaacctaaatatttcttaccgattcacggtgaatatcgcatgttaaaagcacatggt
gaaactggtgtagaatgtggtgttgaggaggataatgtctttatctttgatattggtgac
gtcttagcattaacacatgattccgctcgtaaggctggacgtataccatctggcaatgta
cttgttgatggtagtggtattggggatattggcaacgttgtaattagagaccgtaaaatg
ttatctgaagaaggtcttgtaattgttgttgtaagtattgattttaatactaataaatta
ttgtcaggcccagacattatctcacgaggtttcgtatatatgagagaatctggtcaatta
atttatgatgcacaacgcaaaattaaaactgatgttattagtaagttaaaccaaaacaaa
gatattcaatggcatcaaattaaatcttccattatcgaaacattacaaccatatctatat
gaaaagacagctagaaaacctatgattttaccagttatcatgaaagttaacgaacaaaaa
gaaacaaaaaataaataa
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