Staphylococcus argenteus: SAMSHR1132_13980
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Entry
SAMSHR1132_13980 CDS
T01767
Name
(GenBank) putative helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
suh
Staphylococcus argenteus
Brite
KEGG Orthology (KO) [BR:
suh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suh03019
]
SAMSHR1132_13980
03009 Ribosome biogenesis [BR:
suh03009
]
SAMSHR1132_13980
Enzymes [BR:
suh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAMSHR1132_13980
Messenger RNA biogenesis [BR:
suh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMSHR1132_13980
Ribosome biogenesis [BR:
suh03009
]
Prokaryotic type
rRNA helicases
SAMSHR1132_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4391
Motif
Other DBs
NCBI-ProteinID:
CCE59246
LinkDB
All DBs
Position
complement(1554703..1556049)
Genome browser
AA seq
448 aa
AA seq
DB search
MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLL
PLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKSGVSVKLFIGGTDIEKDKQRC
STQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN
IAVFSATIPQQLQPFLNKYLSHPEFVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI
LNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEFQFVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEESNISLIED
RGFVFNTVDIKDGELKETKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKVKPGYKKKFKQ
EVEKMKRQERKQFSKQQSRQKRKQNKKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatccattcgaacaatttaatctagaatctagtttaattgacgctgtgaaa
gaccttaattttgaaaagccaactgaaattcagaatcgaattattccaagaatattaaag
agaactaatttaattggtcaatctcaaacaggtacagggaaatctcatgcatttttgtta
ccattaatgcaattaattgatagcgagattaaagaaccacaagcaatagtagttgcacca
acaagagagcttgcacaacaactatacgatgctgcgaatcatttaagccaatttaaaagt
ggtgtatcagtaaaattattcattggtggtacagatatcgaaaaagataaacaacgttgt
agcacacagccacaattaattataggtacaccaacaagaattaatgacttagcaaaaacg
ggacatttgcatgttcacttagcatcatatttagttattgatgaagctgatcttatgatc
gacttaggattaatagaagatgttgactatattgctgcaagacttgaagataatgcaaat
atcgcagtatttagtgcgacaattccacaacaactacaaccatttttaaataaatattta
agtcatccagaatttgtagctgttgacagtaaaaagcaaaataaaaagaatattgaattc
tttttaattccaacaaaaggtgctgcaaaagttgaaaaaactttaaatttaattgatata
ttaaatccttacttatgtattattttctgtaatagcagagataatgctaatgatttagcg
cgttctttaaatgaagcaggtattaaagttggtatgattcacggtggtttaacaccacgt
gagcgtaaacagcaaatgaaacgtattcgtaatttagaattccaatttgttattgcgagt
gatttagcatcaagaggtattgatattgaaggagttagtcatgtaattaatttcgacgta
ccaaatgatattgacttcttcacgcacagagtaggcagaactggtcgtggtaactataaa
ggtgtagcaatcacactatatagtccagacgaagagtctaatatttcattaatagaagat
cgtggttttgttttcaatactgttgatattaaagatggagaattaaaagaaactaaagca
cataaccaacgtcaagctagaatgcgcaaagatgaccatttaacaaatcaagtaaaaaat
aaagtaagaagtaaaattaaaaacaaagttaaacctggatataaaaagaaatttaagcaa
gaagtagaaaaaatgaagcgtcaagaacgtaaacaatttagtaaacaacagagcagacaa
aagcgtaaacaaaacaaaaaaggttag
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