Streptococcus suis JS14 (serotype 14): SSUJS14_1886
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Entry
SSUJS14_1886 CDS
T02024
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sui
Streptococcus suis JS14 (serotype 14)
Pathway
sui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUJS14_1886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sui03019
]
SSUJS14_1886
03016 Transfer RNA biogenesis [BR:
sui03016
]
SSUJS14_1886
Enzymes [BR:
sui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SSUJS14_1886
Messenger RNA biogenesis [BR:
sui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SSUJS14_1886
Transfer RNA biogenesis [BR:
sui03016
]
Prokaryotic type
tRNA degradation factors
SSUJS14_1886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
PCB_OB
KH-I_KHDC4-BBP
S1_RRP5
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
ADV70937
LinkDB
All DBs
Position
complement(1868069..1870288)
Genome browser
AA seq
739 aa
AA seq
DB search
MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDP
DASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELIINPDQAQQEASLLELTVAGN
KDAINMVESGAKELSEEVMLEALLKGHAAIQELLDFQNQIVAAVGKEKADVELLQVDPEL
QAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVIATYEEKYAEHEEFDRIMRDVHEIL
ELMEHTEVRRLITEDKVRPDGRRVDEIRPLDAEVDFLPNVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDDEYKKRFLHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVLPS
LEDFPYAIRLVAEVLESNGSSSQASITAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIDGITPQILEEALAQAKKARFEILDVI
EATIPEVRPDLAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAI
FSPDRAAIERTKEIIAGLVREAKVDEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWT
RVNKPEDLVEVGDVVDVKVIKIDDKGRIDASMKALLPKPEGYVEPEKRERSEKPRRHKEH
KEKKDNNFGEFKFHKVDKK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaagtatttgaaacggtttttgctggcaaaaaattggtcgttgaaacaggt
caagttgccaaacaagccaacggtgcggttgtcgttcgctacggtgattccacagttctt
acagcggcagttatgtcaaaaaaaatggcgacgggagacttcttccccctccaagtcaac
tatgaagagaaaatgtacgctgctgggaaattcccaggtggctggatgaagcgtgaaggt
cgtccgtcaactgatgcgaccttgacagctcgtttgattgatcgtccgattcgtccaatg
tttgcggaaggtttccgtaacgaagttcaagtcatcaacacagtgctttcttatgatcca
gatgcatctgctccaatggcagccatgtttggttcctcattggcattagcgatctcagac
attccattcaatggtccaattgctggtgttcaggttggttatgttaatggcgaattgatt
attaacccagatcaagctcaacaagaagcctcccttttagaattgacagttgctggtaac
aaagacgctatcaacatggttgaatcgggtgccaaagaattatcagaagaagtgatgttg
gaagcactcttgaaaggtcatgcggccattcaagaactcttggatttccaaaatcaaatc
gtggcagcagttggtaaggaaaaagcagatgtggagcttcttcaagtggacccagaattg
caggctgagattgttgcagcttacaatgacgatttgaaaaaagcggtgcaggttgaagaa
aaattggcccgtgaagatgcgaccaatgccgttcgcgagactgtcattgcaacttacgaa
gaaaaatacgctgagcacgaagaatttgaccgtatcatgcgtgatgtccatgaaatcttg
gaactcatggagcatacagaagttcgtcgtttgattactgaagacaaggtccgtccagat
ggtcgccgtgttgatgagattcgtcctttggatgcagaagtagacttcttgccaaatgtt
cacggctcaggtctctttacccgtggtcaaacgcaagccctctctgtcttgaccttggca
ccaatgggagaaacccaaatcatcgacggtttggatgatgagtacaagaaacgcttcttg
catcactacaatttcccgcaatactcagttggctcaactggtcgttacggtgcaccaggt
cgtcgtgagattggtcacggtgctctcggtgagcgcgctcttgagcaagtcttgcctagc
ttggaagacttcccttacgctatccgcttggtagcagaagtcttggagtcaaacggttct
tcttcacaggcatctatcacagctgggacccttgcccttatggcaggtggtgtgccaatc
aaggcacccgttgcagggattgctatgggtctgatctcagatggtaccaattacaccgtc
ttgaccgatattcaaggtcttgaggatcacttcggcgacatggacttcaaggtagctggt
actcgtgacggtatcacagcccttcaaatggatattaaaattgacggtatcacaccacaa
atcttggaagaagccttggcacaagctaagaaggcacgttttgaaatccttgatgtcatc
gaagcgactatcccagaagttcgtcctgacttggcaccaactgcaccgaagattgacact
atcaagattgatgtggacaagatcaagattgtcataggtaagggtggtgaaaccattgat
aagattattgcagaaactggcgtgaaaattgatatcgacgaagacggtcttgtggcgatc
ttctcaccagaccgtgctgcaattgagcgcacaaaagaaatcatcgctggtcttgtccgt
gaagcaaaagtggacgaagtcttccaagcaaaagtggttcgtttggagaaattcggtgcc
tttgtcaacctttttgacaagaccgatgccctcgtccacgtttctgaaatggcttggaca
cgtgtcaataaaccagaagatttggttgaggttggcgatgttgtagatgttaaggtgata
aaaattgatgataagggacgtattgatgcttctatgaaagctcttctaccaaaaccagaa
ggctacgtggaaccagaaaaacgtgaacgttcagaaaaacctcgtcgtcataaagaacac
aaagagaaaaaagataataactttggtgaatttaaatttcataaagtagataaaaaataa
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