Streptococcus suis JS14 (serotype 14): SSUJS14_1951
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Entry
SSUJS14_1951 CDS
T02024
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sui
Streptococcus suis JS14 (serotype 14)
Brite
KEGG Orthology (KO) [BR:
sui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sui03019
]
SSUJS14_1951
Messenger RNA biogenesis [BR:
sui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSUJS14_1951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADV71000
LinkDB
All DBs
Position
complement(1938923..1939864)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDEFFEGFYLIKSAEVRQTRAGKDYLALTFQDDTGEIEGKIWDAQPGKIKDFT
AGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEKPPVDVKDTKDYLSQMIFR
IENATWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLSFHTATMVRLADKIGDIYPQLN
KSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHISLIDEEITKVLMELGIDDSLEEV
TVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNIDAEMMMMLSALDKVGPGEMTNRIF
AMDNRAFYKPNID
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagatgaattcttcgaaggattctatctaatcaagtca
gcagaagtccgacaaacacgggctggaaaagactacctagctctgaccttccaggatgat
actggtgagattgaaggcaagatctgggatgcccaaccagggaaaatcaaggattttact
gctggaactgttgttcacatgcaggggcgccgtgaggtttacaacaacaccccccaggtc
aatcaactggttcttcgtttgccaaaggcaggcgagcccaacgaccctgctgatttcaag
gaaaaaccacctgtggatgtcaaggacaccaaggactatttgagccagatgattttccgc
atcgaaaatgccacttggcagcggatcgtccgtgctctctacagcaagtacgacaaggaa
ttctattcctatccagcagccaagaccaatcaccatgccttctactcaggcttgtccttc
catacagcgaccatggtacgcttggcagataaaattggtgacatctatccccagctcaac
aagagcctgctctttgcaggaatcatgcttcatgacctagccaaggtgatcgaactgact
ggtccagacaatactggctacactgtccgtggcaatctgattggtcacatttccttgatt
gatgaagagattaccaaggtcttgatggaattgggcatcgatgacagtctggaggaagtg
actgttctgcgccacgttatcctcagtcaccatgggctcttggagtatggaagccctgtc
cgtccgcagattatggaggcggaaatcctccacatgattgacaacattgatgcggaaatg
atgatgatgctatcggccttggacaaggtcggcccaggcgagatgaccaaccgcatcttt
gccatggataatcgcgccttctataagcccaatatcgactga
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