Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA): SAA6159_01995
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Entry
SAA6159_01995 CDS
T01870
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
suj
Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA)
Pathway
suj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAA6159_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suj03019
]
SAA6159_01995
03009 Ribosome biogenesis [BR:
suj03009
]
SAA6159_01995
Enzymes [BR:
suj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAA6159_01995
Messenger RNA biogenesis [BR:
suj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAA6159_01995
Ribosome biogenesis [BR:
suj03009
]
Prokaryotic type
rRNA helicases
SAA6159_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADL23920
LinkDB
All DBs
Position
complement(2155098..2156618)
Genome browser
AA seq
506 aa
AA seq
DB search
MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL
IEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTML
FSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANG
RKMSALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQ
ELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDGKSKRSKGYSSKKKGN
KKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataatacggttcagtcacttgaatcaatg
ggatttaaagagccgacacctatccaaaaagacagtatcccttatgcgttacaaggaatt
gatatccttggacaagctcaaaccggtacaggtaaaacaggagcattcggtattccttta
attgagaaagtagtagggaaacaaggggttcaatcgttgattttagcacctacaagagaa
ttggcaatgcaggtagctgaacaattaagagaatttagccgtggacaaggtgtccaagtt
gttactgtattcggtggtatgcctatcgaacgccaaattaaagccttgaaaaaaggccca
caaatcgtagtcggaacacctgggcgtgttatcgaccatttaaatcgtcgcacattaaaa
acggacggaattcatactttgattttagatgaagctgatgaaatgatgaatatgggattc
atcgatgatatgagatttattatggataaaattccagcagtacaacgtcaaacaatgttg
ttctcagctacaatgcctaaagcaatccaagctttagtacaacaatttatgaaatcacca
aaaatcattaagacaatgaataatgaaatgtctgatcctcaaatcgaagaattctataca
attgttaaagaattagagaaatttgatacatttacaaatttcctagatgttcatcaacct
gaattagcaatcgtattcggacgtacaaaacgtcgtgttgatgaattaacaagtgctttg
atttctaaaggatataaagctgaaggcttacatggtgatattacacaagcgaaacgttta
gaagtattaaagaaatttaaaaatgaccaaattaatattttagtcgctactgatgtagca
gcaagaggactagatatttctggtgtgagtcatgtttataactttgatatacctcaagat
actgaaagctatacacaccgtattggtcgtacgggtcgtgctggtaaagaaggtatcgcg
gtaacatttgtaaatccaattgaaatggattacattagacaaattgaagatgctaatggt
agaaaaatgagcgcacttcgtccaccacatcgtaaagaagtacttcaagcacgtgaagat
gacatcaaagaaaaagttgaaaactggatgtctaaagagtcagaatcacgcttgaaacgc
atatctacagagttgttaaatgaatataacgatgttgatttagttgctgcacttttacaa
gagttagtagaagcgaacgatgaagttgaagttcaattaacttttgaaaaaccattatct
cgcaaaggccgtaacggtaaaccaagtggttctcgtaacagaaatagtaagcgtggtaat
cctaaatttgacggtaagagtaaacgttcaaaaggatactctagcaagaaaaaaggcaac
aaaaaattcgaccgtaaagagaagagcagcggtggaagcagacctatgaaaggtcgcaca
tttgctgaccatcaaaaataa
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