Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA): SAA6008_00130
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Entry
SAA6008_00130 CDS
T01886
Symbol
cap5D
Name
(GenBank) capsular polysaccharide biosynthesis protein Cap5D
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
suk
Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Pathway
suk00541
Biosynthesis of various nucleotide sugars
suk00552
Teichoic acid biosynthesis
suk01100
Metabolic pathways
suk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
suk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAA6008_00130 (cap5D)
00552 Teichoic acid biosynthesis
SAA6008_00130 (cap5D)
Enzymes [BR:
suk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SAA6008_00130 (cap5D)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_10
KR
NAD_binding_4
adh_short
GFO_IDH_MocA
TrkA_N
DUF3842
Tmemb_170
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
ADL64210
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Position
148551..150314
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AA seq
587 aa
AA seq
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MTFSVFVSYYILEPYFKTYSVKLLILAAISLFISHHISAFIFNMYHRAWEYASVSELILI
VKAVTTSIVITMVFVTIVTGNRPFFRLYLITWMMHLILIGGSRLFWRIYRKYLGGKSFNK
KPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKRNITITEGVKVQGKIADIPEL
VRKYKIKKIIIAIPTIGQERLKEINNICHMDGVELLKMPNIEDVMSGELEVNQLKKVEVE
DLLGRDPVELDMDMISNELTNKTILVTGAGGSIGSEICRQVCNFYPERIILLGHGENSIY
LINRELRNRFGKNVDIVPIIADVQNRARMFEIMEMYKPYAVYHAAAHKHVPLMEDNPEEA
VRNNILGTKNTAEAAKNAEVKKFVMISTDKAVNPPNVMGASKRIAEMIIQSLNDETHRTN
FVAVRFGNVLGSRGSVIPLFKSQIEEGGPVTVTHPEMTRYFMTIPEASRLVLQAGALAEG
GEVFVLDMGEPVKIVDLARNLIKLSGKKEDDIRITFTGIRPGEKMYEELMNKDEIHPEQV
FEKIYRGKVQHMKCNEVEAIIQDIVNDFSKEKIINYANGKKGDNYVR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgacattttcagtattcgtaagttattacattttagaaccgtatttcaaaacatattct
gtcaaattattaatattggcagctatatcactattcatatcgcatcatatttcagcattt
atttttaatatgtatcatcgagcgtgggaatatgccagtgtgagtgaattgattttaatt
gttaaagctgtgacgacatctatcgttattacgatggtgttcgtgacaattgttacaggc
aatagaccgttttttaggttgtatttaattacttggatgatgcacttgattttaataggt
ggctcaaggttattttggcgtatttatcggaaataccttggaggtaagtcatttaataag
aagccaactttagttgttggtgctggtcaagcaggttcaatgctgattagacaaatgttg
aaaagtgacgaaatgaaacttgaaccggtattagcagtcgatgatgacgaacataaacgt
aatatcacaattactgagggtgtaaaagtccaaggtaaaatcgcggatattccagaacta
gtgaggaaatataagattaaaaaaattatcattgcaattccaactattggtcaagagcgt
ttgaaagaaattaataatatttgccatatggatggcgtagagttattgaaaatgccaaat
atagaagacgtcatgtctggtgagttagaagtgaaccaactgaaaaaagttgaagtagaa
gatttacttggcagagatcctgttgaattagatatggatatgatatcaaatgaattgacg
aataaaactattttagttacgggcgctggaggttcaataggatcagaaatttgtagacaa
gtttgtaatttctatccagaacgtattattctacttggccatggtgaaaacagtatttat
ttaatcaatcgtgaattgcgaaatcgcttcggaaaaaatgttgatatcgttcctattata
gcggatgtgcaaaatagagcgcgtatgtttgaaattatggaaatgtataaaccatacgca
gtttatcatgcagcagcacacaagcacgtgccgttaatggaagacaaccctgaagaagca
gtacgtaataatattttaggtacgaaaaatactgctgaagctgctaaaaatgcagaggta
aagaaattcgttatgatttctacggataaagccgttaatccacctaatgtcatgggagct
tcaaagcgaattgcagaaatgattattcaaagtttaaatgatgaaacgcatcgaacaaat
tttgttgcagtgagatttggtaatgtacttggatcgagaggatctgtgattccacttttc
aaaagtcaaattgaagaaggtgggccagttactgtgacacatcctgaaatgacacgttac
tttatgacaattcctgaagcttctagactagttttgcaggcaggggcattagcagaaggt
ggcgaagtatttgtgttagatatgggagaaccagtgaaaatagtagatttagcacgaaat
ttaattaagttaagtggtaagaaagaagacgatatacgcattacttttacagggattaga
cctggtgaaaaaatgtatgaagaattgatgaataaggatgaaattcaccctgaacaagta
tttgaaaaaatttatcgtggcaaagtacaacatatgaaatgtaatgaagttgaagcgatt
attcaagacatcgtcaatgactttagtaaagaaaaaattattaactatgccaatggcaaa
aagggagataattatgttcgatga
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