Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA): SAA6008_00488
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Entry
SAA6008_00488 CDS
T01886
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
suk
Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Pathway
suk03030
DNA replication
suk03430
Mismatch repair
suk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAA6008_00488 (holB)
03430 Mismatch repair
SAA6008_00488 (holB)
03440 Homologous recombination
SAA6008_00488 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suk03032
]
SAA6008_00488 (holB)
03400 DNA repair and recombination proteins [BR:
suk03400
]
SAA6008_00488 (holB)
Enzymes [BR:
suk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAA6008_00488 (holB)
DNA replication proteins [BR:
suk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAA6008_00488 (holB)
DNA repair and recombination proteins [BR:
suk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAA6008_00488 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ADL64551
LinkDB
All DBs
Position
534143..535069
Genome browser
AA seq
308 aa
AA seq
DB search
MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQTDSQCETKVSTYNHPD
FMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEKLTVQGENSILKFLEEPPD
NTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLVEQNMSKPVAEMISTYTTQID
NAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIIDLLKQAKNKKLQSLTIAAVNGFF
EDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLILMFDQLTEAHKKLNQNVNPTLVFE
QIVIKGVS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagcaacaattgacgaatgcatatcattcaaataaattatcgcatgcctat
ttatttgaaggtgatgatgcacaaacgatgaaacaagttgcgattaattttgcaaagctt
attttatgtcaaacagatagtcaatgtgaaacaaaggttagtacatataatcatccagac
tttatgtatatatcaacaactgagaatgcaattaagaaagaacaagttgaacaacttgtg
cgtcatatgaatcaacttcctatagaaagcacaaataaagtgtacatcattgaagacttt
gaaaagttaactgttcaaggggaaaacagtatcttgaaatttcttgaagaaccaccggac
aatacgattgctattttattgtctacaaaacctgagcaaattttagacacaatccattca
aggtgtcagcatgtatatttcaagcctattgataaagaaaagtttataaatagattagtt
gaacaaaacatgtctaagccagtagctgaaatgattagtacttatactacgcaaatagat
aatgcaatggctttaaatgaagaatttgatttattagcattaaggaaatcagttatacgt
tggtgtgaattgttgcttactaataagccaatggcacttataggtattattgatttattg
aaacaggctaaaaataaaaaactgcaatctttaactattgcagctgtgaatggtttcttc
gaagatatcatacatacaaaggtaaatgtagaggataaacaaatatatagtgatttaaaa
aatgatattgatcaatatgcgcaaaagttgtcgtttaatcaattaattttgatgtttgat
caactgacggaagcacataagaaattgaatcaaaatgtaaatccaacgcttgtatttgaa
caaatcgtaattaagggtgtgagttag
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