Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA): SAA6008_01051
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Entry
SAA6008_01051 CDS
T01886
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
suk
Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Pathway
suk00010
Glycolysis / Gluconeogenesis
suk00020
Citrate cycle (TCA cycle)
suk00260
Glycine, serine and threonine metabolism
suk00280
Valine, leucine and isoleucine degradation
suk00310
Lysine degradation
suk00380
Tryptophan metabolism
suk00620
Pyruvate metabolism
suk00630
Glyoxylate and dicarboxylate metabolism
suk00640
Propanoate metabolism
suk00670
One carbon pool by folate
suk00785
Lipoic acid metabolism
suk01100
Metabolic pathways
suk01110
Biosynthesis of secondary metabolites
suk01120
Microbial metabolism in diverse environments
suk01200
Carbon metabolism
suk01210
2-Oxocarboxylic acid metabolism
suk01240
Biosynthesis of cofactors
Module
suk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
suk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
suk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
suk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
suk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SAA6008_01051 (pdhD)
00020 Citrate cycle (TCA cycle)
SAA6008_01051 (pdhD)
00620 Pyruvate metabolism
SAA6008_01051 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SAA6008_01051 (pdhD)
00640 Propanoate metabolism
SAA6008_01051 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAA6008_01051 (pdhD)
00280 Valine, leucine and isoleucine degradation
SAA6008_01051 (pdhD)
00310 Lysine degradation
SAA6008_01051 (pdhD)
00380 Tryptophan metabolism
SAA6008_01051 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAA6008_01051 (pdhD)
00670 One carbon pool by folate
SAA6008_01051 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
suk04147
]
SAA6008_01051 (pdhD)
Enzymes [BR:
suk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SAA6008_01051 (pdhD)
Exosome [BR:
suk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SAA6008_01051 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
NAD_binding_8
FAD_binding_2
FAD_binding_3
DAO
3HCDH_N
AlaDh_PNT_C
UDPG_MGDP_dh_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADL65097
LinkDB
All DBs
Position
1118416..1119822
Genome browser
AA seq
468 aa
AA seq
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MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLH
ASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAY
FVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLV
VVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA
KSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDK
QSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELAT
VGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGAS
DIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagttggagatttcccaattgaaacagatactatagtaatcggagcaggtcctggt
ggatacgttgcagcaattcgtgcagctcaattaggacaaaaagtaacaatcgttgagaaa
ggtaatcttggtggtgtttgcttaaacgtaggatgtattccttcaaaagcattactacat
gcttctcaccgttttgttgaagcacaacattctgaaaacttaggtgttattgctgaaagt
gtttctttaaacttccaaaaagttcaagaattcaaatcatcagttgttaataaattaact
ggtggtgttgaaggcttacttaaaggtaacaaagttaacatcgttaaaggtgaagcatat
ttcgtagataacaatagcttacgtgttatggacgaaaagagcgcacaaacatacaacttt
aaaaatgcaatcattgcaacaggttcaagaccaattgaaattcctaatttcaaattcggt
aaacgtgttatcgactcaacaggtgctttaaacttacaagaagtaccaggtaaattagtt
gtagttggtggaggatacattggatcagaattaggtacagcatttgctaactttggttca
gaagtaaccatccttgaaggtgctaaagatatcttaggtggcttcgaaaaacaaatgaca
caacctgttaaaaaaggtatgaaagaaaaaggtgttgaaatcgttactgaagctatggct
aaatcagctgaagaaacagataacggagttaaagttacttatgaagctaaaggcgaagag
aaaacaatcgaagctgattatgtattagtaactgtaggtcgtcgtccaaacacagacgaa
ttaggcctagaagaattaggtgttaaattcgctgaccgtggattattagaagttgataaa
caaagccgtacgtctatcagcaatatctatgcaattggtgatatcgttccaggtttacca
cttgctcacaaagctagctatgaagctaaagttgctgctgaagcaattgatggtcaagct
gctgaagttgattacattggtatgccagcagtatgctttactgaaccagaattagctaca
gttggttattcagaagcgcaagctaaagaagaaggtttagcaattaaagcttctaaattc
ccatatgcagcaaatggtcgtgcattatcattagatgatactaacggatttgttaaactt
attacacttaaagaagatgatactttaatcggtgctcaagtagttggtactggtgcatca
gatattatctctgaattaggtttagcaattgaagctggtatgaatgctgaagatatcgca
ttaacaatccatgcacatccaacattaggtgagatgactatggaagcagcagaaaaagct
atcggatacccaatccatacaatgtaa
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