Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA): SAA6008_01219
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Entry
SAA6008_01219 CDS
T01886
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
suk
Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Pathway
suk03030
DNA replication
suk03430
Mismatch repair
suk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAA6008_01219 (polC)
03430 Mismatch repair
SAA6008_01219 (polC)
03440 Homologous recombination
SAA6008_01219 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suk03032
]
SAA6008_01219 (polC)
03400 DNA repair and recombination proteins [BR:
suk03400
]
SAA6008_01219 (polC)
Enzymes [BR:
suk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAA6008_01219 (polC)
DNA replication proteins [BR:
suk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAA6008_01219 (polC)
DNA repair and recombination proteins [BR:
suk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAA6008_01219 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
Ribosomal_S19e
Motif
Other DBs
NCBI-ProteinID:
ADL65264
LinkDB
All DBs
Position
1295844..1300160
Genome browser
AA seq
1438 aa
AA seq
DB search
MAMTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEFHITLPQFLAHEDYL
LFINAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTALSPKVKGQLKQKKLIM
SGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIFETNDNDQEQNLASLEAHI
QEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGKPIQIENIKPIESIIEEEFKV
AIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRVEFHLHTAMSQMDGIPNIGAYVKQA
ADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMIYGMEGMLVDDGVPIAYKPQDVVLKDA
TYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDM
LVDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVLNHNEINKKL
SNEDAYKRARPSHVTLIVQNQQGLKNLFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVG
TACDEGELFTAVMQKDQSQVEKIAKYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRL
IHAGDTAGIPVIATGNAHYLFEHDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEF
HFLGEEKAHEIVVKNTNELADRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGED
LPQIVIDRLEKELKSIIGNGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIK
YMFPKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDM
YSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatgacagagcaacaaaaatttaaagtgcttgctgatcaaattaaaatttcaaat
caattagatgctgaaattttaaattcaggtgaactgacacgtatagatgtttctaacaaa
aacagaacatgggaatttcatattacattaccacaattcttagctcatgaagattattta
ttatttataaatgcaatagagcaagagtttaaagatatcgccaacgttacatgtcgtttt
acggtaacaaatggcacgaatcaagatgaacatgcaattaaatactttgggcactgtatt
gaccaaacagctttatctccaaaagttaaaggtcaattgaaacagaaaaagcttattatg
tctggaaaagtattaaaagtaatggtatcaaatgacattgaacgtaatcattttgataag
gcatgtaatggaagtcttatcaaagcgtttagaaattgtggttttgatatcgataaaatc
atattcgaaacaaatgataatgatcaagaacaaaacttagcttctttagaagcacatatt
caagaagaagacgaacaaagtgcacgattggcaacagagaaacttgaaaaaatgaaagct
gaaaaagcgaaacaacaagataacaacgaaagtgctgtcgataagtgtcaaattggtaag
ccgattcaaattgaaaatattaaaccaattgaatctattattgaggaagagtttaaagtt
gcaatagagggtgtcatttttgatataaacttaaaagaacttaaaagtggtcgccatatc
gtagaaattaaagtgactgactatacggactctttagttttaaaaatgtttactcgtaaa
aacaaagatgatttagaacattttaaagcgctaagtgttggtaaatgggttagggctcaa
ggtcgtattgaagaagatacatttattagagatttagttatgatgatgtctgatattgaa
gagattaaaaaagcgacaaaaaaagataaggctgaagaaaagcgtgtagaattccacttg
catactgcaatgagccaaatggatggtatacccaatattggtgcgtatgttaaacaggca
gcagactggggacatccagccattgcggttacagaccataatgttgtgcaagcatttcca
gatgctcacgcagcagcggaaaaacatggcattaaaatgatatacggtatggaaggtatg
ttagttgatgatggtgttccgattgcatacaaaccacaagatgtcgtattaaaagatgct
acttatgttgtgttcgacgttgagacaactggtttatcaaatcagtatgataaaatcatc
gagcttgcagctgtgaaagttcataacggtgaaatcatcgataagtttgaaaggtttagt
aatccgcatgaacgattatcggaaacgattatcaatttgacgcatattactgatgatatg
ttagtagatgcccctgagattgaagaagtacttacagagtttaaagaatgggttggcgat
gcgatattcgtagcgcataatgcttcgtttgatatgggcttcatcgatacgggatatgaa
cgtcttgggtttggaccatcaacgaatggtgttatcgatactttagaattatctcgtacg
attaatactgaatatggtaaacatggtttgaatttcttggctaaaaaatatggcgtagaa
ttaacgcaacatcaccgtgccatttatgatacagaagcaacagcttacattttcataaaa
atggttcaacaaatgaaagaattaggcgtattaaatcataacgaaatcaacaaaaaactc
agtaatgaagatgcatataaacgtgcaagacctagtcatgtcacattaattgtacaaaac
caacaaggtcttaaaaatctatttaaaattgtaagtgcatcattggtgaagtatttctac
cgtacacctcgaattccacgttcattgttagatgaatatcgtgagggattattggtaggt
acagcgtgtgatgaaggtgaattatttacggcagttatgcagaaggaccagagtcaagtt
gaaaaaattgccaaatattatgattttattgaaattcaaccaccggcactttatcaagat
ttaattgatagagagcttattagagatactgaaacattacatgaaatttatcaacgttta
atacatgcaggtgacacagcgggtatacctgttattgcgacaggaaatgcacactatttg
tttgaacatgatggtatcgcacgtaaaattttaatagcatcacaacccggcaatccactt
aatcgctcaactttaccggaagcacattttagaactacagatgaaatgttaaacgagttt
cattttttaggtgaagaaaaagcgcatgaaattgttgtgaaaaatacaaacgaattagca
gatcgaattgaacgtgttgttcctattaaagatgaattatacacaccgcgtatggaaggt
gctaacgaagaaattagagaactaagttatgcaaatgcgcgtaaactgtatggtgaagac
ctgcctcaaatcgtaattgatcgattagaaaaagaattaaaaagtattatcggtaatgga
tttgcggtaatttacttaatttcgcaacgtttagttaaaaaatcattagatgatggatac
ttagttggttcccgtggttcagtaggttctagttttgtagcgacaatgactgagattact
gaagtaaacccgttaccgccacactatatttgtccgaactgtaaaacgagtgaatttttc
aatgatggttcagtaggatcaggatttgatttacctgataagacgtgtgaaacttgtgga
gcgccacttattaaagaaggacaagatattccgtttgaaacatttttaggatttaaggga
gataaagttcctgatatcgacttaaactttagtggtgaatatcaaccgaatgcccataac
tacacaaaagtattatttggtgaggataaagtattccgtgcaggtacaattggtactgtt
gctgaaaagactgcttttggttatgttaaaggttatttgaatgatcaaggtatccacaaa
agaggtgctgaaatagatcgactcgttaaaggatgtacaggtgttaaacgtacaactgga
cagcatccagggggtattattgtagtacctgattacatggatatttatgattttacgccg
atacaatatcctgccgatgatcaaaattcagcatggatgacgacacattttgatttccat
tctattcatgataatgtattaaaacttgatatacttggacacgatgatccaacaatgatt
cgtatgcttcaagatttatcaggaattgatccaaaaacaatacctgtagatgataaagaa
gttatgcagatatttagtacacctgaaagtttgggtgttactgaagatgaaattttatgt
aaaacaggtacatttggggtaccagaattcggtacaggattcgtgcgtcaaatgttagaa
gatacaaagccaacaacattttctgaattagttcaaatctcaggattatctcatggtaca
gatgtgtggttaggcaatgctcaagaattaattaaaaccggtatatgtgatttatcaagt
gtaattggttgtcgtgatgatatcatggtttatttaatgtatgctggtttagaaccatca
atggcttttaaaataatggagtcagtacgtaaaggtaaaggtttaactgaagaaatgatt
gaaacgatgaaagaaaatgaagtgccagattggtatttagattcatgtcttaaaattaag
tacatgttccctaaagcccatgcagcagcatacgttttaatggcagtacgtatcgcatat
ttcaaagtacatcatccactttattactatgcatcttactttacaattcgtgcgtcagac
tttgatttaatcacgatgattaaagataaaacaagcattcgaaatactgtaaaagacatg
tattctcgctatatggatctaggtaaaaaagaaaaagacgtattaacagtcttggaaatt
atgaatgaaatggcgcatcgaggttatcgaatgcaaccgattagtttagaaaagagtcag
gcgttcgaatttatcattgaaggcgatacacttattccgccgttcatatcagtgcctggg
cttggcgaaaacgttgcgaaacgaattgttgaagctcgtgacgatggcccatttttatca
aaagaagatttaaacaaaaaagctggattatctcagaaaattattgagtatttagatgag
ttaggctcattaccgaatttaccagataaagctcaactttcgatatttgatatgtaa
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integrated database retrieval system
