KEGG   Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA): SAA6008_01319
Entry
SAA6008_01319     CDS       T01886                                 
Symbol
gyrB_1
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
suk  Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Brite
KEGG Orthology (KO) [BR:suk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suk03032]
    SAA6008_01319 (gyrB_1)
   03036 Chromosome and associated proteins [BR:suk03036]
    SAA6008_01319 (gyrB_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:suk02048]
    SAA6008_01319 (gyrB_1)
Enzymes [BR:suk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SAA6008_01319 (gyrB_1)
DNA replication proteins [BR:suk03032]
 Prokaryotic type
  DNA Topoisomerases
   SAA6008_01319 (gyrB_1)
Chromosome and associated proteins [BR:suk03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SAA6008_01319 (gyrB_1)
Prokaryotic defense system [BR:suk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    SAA6008_01319 (gyrB_1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: ADL65362
LinkDB
Position
1400986..1402983
AA seq 665 aa
MAMNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN
EIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGV
GASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKKGKTKKTGTKVTFKPDDTIFK
ASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKERQEHYHYEEGIKEFVSYVNEGKEV
LHDVATFSGEANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDY
ARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELLQFEGQTKSKLGTSEARSAVDSVVA
DKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNKRKDTLLSGKLTPAQS
KNTEKNELYLVEGDSAGGSAKLGRDRKFQAILPLRGKVINTEKARLEDIFKNEEINTIIH
TIGAGVGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPP
LYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGFTLQRYKGLGEMNPEQLWETTMNPETR
TLIRVQVEDEVRSSKRVTTLMGDKVQPRREWIEKHVEFGMQEDQSILDNSEVQVLENDQF
DEEEI
NT seq 1998 nt   +upstreamnt  +downstreamnt
ttggcaatgaataaacaaaataattattcagatgattcaatacaggttttagaggggtta
gaagcagttcgtaaaagacctggtatgtatattggatcaactgataaacggggattacat
catctagtatatgaaattgtcgataactccgtcgatgaagtattgaatggttacggtaac
gaaatagatgtaacaattaataaagatggtagtatttctatagaagataatggacgtggt
atgccaacaggtatacataaatcaggtaaaccgacagtcgaagttatctttactgtttta
catgcaggaggtaaatttggacaaggcggctataaaacttcaggtggtcttcacggtgtt
ggtgcttcagttgtaaatgcattgagtgaatggcttgaagttgaaatccatcgagatggt
aatatatatcatcaaagttttaaaaacggtggttcgccatcttctggtttagtgaaaaaa
ggtaaaactaagaaaacaggtaccaaagtaacatttaaacctgatgacacaatttttaaa
gcatctacatcatttaattttgatgttttaagtgaacgactacaagagtctgcgttctta
ttgaaaaatttaaaaataacgcttaatgatttacgcagtggtaaagagcgtcaagagcat
taccattatgaagaaggaatcaaagagtttgttagttatgtcaatgaaggaaaagaagtt
ttgcatgacgtggctacattttcaggtgaagcaaatggtatagaggtagacgtagctttc
caatataatgatcaatattcagaaagtattttaagttttgtaaataatgtacgtactaaa
gatggtggtacacatgaagttggttttaaaacagcaatgacacgtgtatttaatgattat
gcacgtcgtattaatgaacttaaaacaaaagataaaaacttagatggtaatgatattcgt
gaaggtttaacagctgttgtgtctgttcgtattccagaagaattattgcaatttgaagga
caaacgaaatctaaattgggtacttctgaagctagaagtgctgttgattcagttgttgca
gacaaattgccattctatttagaagaaaaaggacaattgtctaaatcacttgtgaaaaaa
gcgattaaagcacaacaagcaagggaagctgcacgtaaagctcgtgaagatgctcgttca
ggtaagaaaaacaagcgtaaagacactttgctatctggtaaattaacacctgcacaaagt
aaaaacactgaaaaaaatgaattgtatttagtcgaaggtgattctgcgggaggttcagca
aaacttggacgagaccgcaaattccaagcgatattaccattacgtggtaaggtaattaat
acagagaaagcacgtctagaagatatttttaaaaatgaagaaattaatacaattatccac
acaatcggggcaggcgttggtactgactttaaaattgaagatagtaattataatcgtgta
attattatgactgatgctgatactgatggtgcgcatattcaagtgctattgttaacattc
ttcttcaaatatatgaaaccgcttgttcaagcaggtcgtgtatttattgctttacctcca
ctttataaattggaaaaaggtaaaggcaaaacaaagcgagttgaatacgcttggacagac
gaagagcttaataaattgcaaaaagaacttggtaaaggcttcacgttacaacgttacaaa
ggtttgggtgaaatgaaccctgaacaattatgggaaacgacgatgaacccagaaacacga
actttaattcgtgtacaagttgaagatgaagtgcgttcatctaaacgtgtaacaacatta
atgggtgacaaagtacaacctagacgtgaatggattgaaaagcatgttgagtttggtatg
caagaggaccaaagtattttagataattctgaagtacaagtgcttgaaaatgatcaattt
gatgaggaggaaatctag

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