Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0104
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Entry
SYO3AOP1_0104 CDS
T00715
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul00550
Peptidoglycan biosynthesis
sul01100
Metabolic pathways
sul01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SYO3AOP1_0104
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SYO3AOP1_0104
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sul01011
]
SYO3AOP1_0104
Enzymes [BR:
sul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SYO3AOP1_0104
Peptidoglycan biosynthesis and degradation proteins [BR:
sul01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SYO3AOP1_0104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACD65750
LinkDB
All DBs
Position
complement(114640..116439)
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AA seq
599 aa
AA seq
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MIKFNRLTFLIFVLTVFYFALVGRLFYLQIIKGEYYREISDRNYIKIFYSNPPRGKIYDR
NGVLLAYDVPTYSLIAFPYIVKKNYTVQELKENLKNYLNIELDEKTLNIIEKNLYPSVII
KKDLTQKDIENFYNYNYLFNGFYLEVVPKRVYTEEANYLAHIIGYVGYPSEKELKENPNL
SPNILVGKAGVEKIYDSLLRGESGQKAVLVDAFGRQKKVLWEKDPRKGNDIYLSIDIRIQ
KITFEAFSSSKHPSGAVVLVDPSTYEILALLSYPTYSLQKFYEGFSQEEWKELTENKYKP
LMNKVFLGKYPPGSIYKPLVSIAALEEGVIAPEARISSGSEFRIGKWVYRNWNKRGCGFI
NVSEALETSCDTFFYQVGLKLGVENIVKYSKLFGLGEKLNPDLEVKVATIPSKEWKRKVL
KQNWFHGDTVNLSIGQGYITITPFDATKIVVPIANGGYVLKPHILKAYFDNKSQRLVHTN
PEVIRKIDIKKRNLDAVRYGMYLVVYGPSGTAKALKRVPVLNAGKTGTAQVYSYDTRKKR
HHAWDFRDHAWFIDYAPYNKPKIAGVVFIEHGESGGKVAAPLMAYILKRIFKEKIIETE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtttaatagattaacttttctaattttcgttctaacggtattttattttgca
ttagtaggaaggttgttttatcttcagatcattaagggggaatattacagagaaatttca
gacaggaattacataaaaattttctattcaaacccaccaagaggtaaaatttacgataga
aatggagtcttattagcttatgacgttccaacctatagcttgatagcattcccatacata
gttaagaaaaactacactgtgcaagaactaaaggaaaatttaaaaaattatcttaacatt
gaattagacgagaaaacattaaatatcattgaaaaaaacttatatcccagcgttattata
aaaaaagatttaactcagaaggatatagaaaacttttataattataactatctatttaat
ggattctatcttgaagttgttccaaagagagtttacacagaagaagcaaattatcttgca
catataattggatacgttggatatccttcagagaaagagctaaaagaaaatcctaatctt
tctccaaacattcttgtgggaaaagcgggagtagaaaaaatttacgactcattgttaaga
ggtgaatctggacaaaaggcagtattagtagatgcatttggtagacagaaaaaagtttta
tgggaaaaagacccaagaaaaggcaatgatatttatttatcaatagatataagaatacaa
aaaataaccttcgaagcttttagctcttcaaaacatccatcaggggctgttgtcttagta
gacccaagcacttacgaaatcttagctttattaagctatccaacctatagcttacaaaaa
ttttatgaaggtttttctcaagaagaatggaaagaattaacggagaacaagtataagcct
ttaatgaataaagtattcttagggaaatatccgcccgggtctatctataaacctttggtc
agtatagctgcattggaagaaggtgtgatagctcctgaggcaaggataagcagtggttct
gagtttagaataggaaaatgggtttatagaaactggaataaaagaggttgtggattcata
aatgtatctgaagctttggaaacatcctgcgatacctttttctatcaagttgggttaaag
cttggggtagagaatattgtaaaatattcaaagctatttggattaggagaaaaattgaac
ccggacttagaggttaaagttgcaacaattccaagcaaagaatggaagagaaaagtttta
aagcaaaactggtttcacggagatacagtaaacctcagcatcggacaaggatatattaca
ataacaccttttgatgcaacaaagatagttgtgccaattgcaaatggtggatatgtatta
aaaccacatatattgaaggcttactttgacaacaaatctcaaagattagttcatacaaat
ccagaagtaataagaaaaatagacataaaaaaacggaatttagatgcggtaagatatggc
atgtatcttgttgtttatggaccaagcggaacagcaaaagcattgaaaagggttcctgta
ctaaatgccggaaaaacaggaacagcgcaagtgtattcttatgatacaagaaaaaaacgt
catcatgcgtgggattttagagaccatgcttggtttatagattatgcaccatataataaa
cctaaaatagccggcgtggtatttattgaacacggtgaaagtggtggaaaagtggctgct
ccgttaatggcatacatattaaaaagaatttttaaagaaaaaatcatcgagactgagtaa
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