Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0135
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Entry
SYO3AOP1_0135 CDS
T00715
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_0135
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SYO3AOP1_0135
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Paralog
GFIT
Motif
Pfam:
DUF87
HAS-barrel
TrwB_AAD_bind
HerA_C
AAA_10
FtsK_SpoIIIE
T4SS-DNA_transf
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ACD65781
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Position
149383..150945
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AA seq
520 aa
AA seq
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MEKLGIVVGSTKPNRVNFLSNKPLRLGQFVILKYFDGDEEIRLLGMINKVERENKYIPED
IPNYEKIDRLIKESSSETKVKGEIQILGKIAERDNGITLEFQRTPPLPASEVLKPPKEIL
EKLFGSKGKNYIKIGKLLSEAEDVNVYIDINQIVLRHLAILAITGAGKSNTVSVLLDNIV
NLKGTVVVFDFHGEYTRAEFRRDGKNVVNVIKPLVDPTTLDKKDFAKLIGIRENATTQYR
YFKYAVDKVLRDLKDEKGDDWRRFVETESFFDRLIGELESWTDEEKSSPFKGKIREESLY
EVINKIEDTMVDLSHIIKIGAKDLIENIRPGMVNVFDFSEVDEEVADALASNILKHSLIE
RKKAVRGSNSKIPNPILIVVEEAHILAGVKSDTDSKYWMTRIAREGRKFGLGLCVVTQRP
KGLDKEILSQMNNMIILKLVEPEDQKHVQSASESLSSELMEYLPSLNPGEAIILGNMTKI
PLLIKIDKAKGKIQGNDIPVVDKWLGSEEKVSKLEDLKDF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcttggaatagttgtaggttctacaaaaccaaacagagttaatttcttatct
aataaaccactcagacttggtcagtttgtgattttaaaatactttgatggcgatgaagaa
ataaggcttcttggaatgattaataaagttgaaagagaaaataaatatattccggaagat
attccaaattatgaaaaaattgacagattgataaaagaaagttcaagtgagacaaaggtt
aaaggagaaattcaaattcttggaaaaattgcagaaagggataacggaataactcttgaa
tttcaaaggacgcctcctcttccagcatcagaagttttaaagccaccaaaagaaatatta
gaaaaactctttggctcaaaaggaaaaaattatataaaaattggaaagcttttaagtgaa
gcagaagatgtaaatgtgtatattgatattaatcaaatcgttttgagacatcttgcaatc
cttgcaatcacaggagcaggaaagtctaacacagtatcggtactacttgacaatatagtt
aatttaaaaggaactgttgttgtgtttgattttcacggagagtatacaagagctgaattt
agaagagatgggaaaaatgttgtaaatgttataaaacctctcgttgacccaactaccctt
gataaaaaagattttgcaaagctaataggaattagagaaaatgcaactactcagtataga
tactttaaatatgcagttgataaagtattaagagatttaaaagatgaaaaaggcgatgat
tggagaaggtttgtagagactgaaagtttttttgacagattgattggtgagcttgaaagt
tggacggatgaagaaaaatcatctccatttaaaggtaaaatcagagaagaatctctttat
gaagttataaataaaattgaagatacaatggtagatctaagccatataataaaaattggt
gcaaaagaccttatagaaaatataagaccgggtatggtaaatgtttttgacttttcagaa
gttgatgaagaagtagcagatgcccttgcatctaacattttaaaacattctttaatagaa
agaaaaaaagcagtaagaggaagtaatagcaaaatcccaaacccaattttaatcgttgtt
gaagaagctcacattcttgcaggtgttaaatctgacacagactctaaatattggatgaca
agaatagcaagagaaggtagaaagtttgggcttggcttatgcgttgttacacaaagacca
aaaggtttagataaagaaattttatctcagatgaacaatatgataatactaaaacttgtt
gaaccagaagaccaaaaacatgttcaaagtgcaagtgaatcattatcttctgagcttatg
gaatacctgccatctcttaacccaggagaagctataattcttggaaatatgacaaaaatt
ccactgttaattaagattgacaaagctaaaggaaaaatacaaggtaatgatataccagtt
gttgataaatggctcggttctgaagaaaaagtaagtaaattagaagatttaaaggacttt
taa
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