Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0179
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Entry
SYO3AOP1_0179 CDS
T00715
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul03030
DNA replication
sul03430
Mismatch repair
sul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYO3AOP1_0179
03430 Mismatch repair
SYO3AOP1_0179
03440 Homologous recombination
SYO3AOP1_0179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sul03032
]
SYO3AOP1_0179
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_0179
Enzymes [BR:
sul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYO3AOP1_0179
DNA replication proteins [BR:
sul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYO3AOP1_0179
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYO3AOP1_0179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
MAAL_C
DUF3990
Motif
Other DBs
NCBI-ProteinID:
ACD65824
LinkDB
All DBs
Position
complement(196213..197208)
Genome browser
AA seq
331 aa
AA seq
DB search
MSEIKASQLLKEFNLSQLKPVLIIYGDEYLTKALVVEKFKSVLPVKVYWGDELDYTSFRN
HLFSKDLFSSSKAIVVRDFEAFTDKLKKDELKQIIEDIKNIKLPDRLVLIVNLEKLDKEP
YKSLLKLGNVDVVISKKLTFQGFLTSLKNKLAKEGKTVSDENLKYLASLLNNDLTIAKNE
VEKLLLYVGDKKEITKEDIDAVVTPVFEENVFNFLDKFFKKDISALKIFINLLNNGVHPF
EIQSLILSQLEKALQTKILIEAGNSLEEALNKAGINHPLQKVNISNILKNLSKEEMVKLL
DNLYNLEVAQKIYYQDINETSKEFILNFVRS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagataaaagcaagccagcttttaaaagaatttaatttaagtcagttaaagccg
gttttaattatctacggagatgagtatctaacaaaggctcttgtcgttgagaagtttaaa
tcggttttgcctgtaaaagtttactggggagatgagttagattatacatcttttagaaat
catcttttttcaaaagatttattctcatcttcaaaggcaatagttgttagagattttgaa
gcctttacagataagcttaaaaaggacgagttaaaacaaatcatagaagatattaaaaat
ataaaactaccagatagattggttttaattgtaaatttagaaaagttggataaagagcct
tataaatctttgttaaaacttggtaatgttgatgttgtaatttctaaaaaattaactttt
cagggatttttgacttctttaaaaaacaaattggcaaaggaaggaaaaaccgtttcagat
gaaaatttaaaataccttgcaagccttttaaacaacgatttgacaatagcaaaaaatgaa
gtggaaaaacttttattgtacgttggagataagaaagaaataacaaaagaagatatagat
gctgtagttactcctgtttttgaagagaatgtatttaattttttagacaaattttttaaa
aaagatatttctgctttaaagatttttatcaatctgcttaataacggcgttcatcccttt
gaaattcaaagcttaatcttatctcagttagaaaaagctttacaaacaaagattttaata
gaagccggcaacagtttagaagaagctttaaataaagcaggaataaaccatccattacaa
aaggtaaacatttcaaatattttaaaaaatctatctaaggaagagatggttaagctttta
gataatctttacaacttggaagtggcacaaaaaatatactatcaagatataaacgagact
tcaaaagagtttattcttaactttgtaaggagctaa
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