| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
sul Sulfurihydrogenibium sp. YO3AOP1
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sul00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SYO3AOP1_0297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sul03021]
SYO3AOP1_0297
03400 DNA repair and recombination proteins [BR:sul03400]
SYO3AOP1_0297
Enzymes [BR:sul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SYO3AOP1_0297
Transcription machinery [BR:sul03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SYO3AOP1_0297
DNA repair and recombination proteins [BR:sul03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SYO3AOP1_0297
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(300645..305384)
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| AA seq |
1579 aa
MEAKERKETVRFDAIRLSLASPEIIRSWSHGEVKKPETLNYRTLKPEKDGLFDARIFGPI
KDYECLCGKYKKRKYEGTICDRCGVEVTRSDVRRERFGHIELASPVVHIWYLKSTPSKIG
SLLDLTSRDIERVVYFESYLVIEHPTEEEEEAFEKDPKSLPLMEGGLTKYVKLHVVSEDE
FREREYEYSNAEKYEYGMGAEKVKDVLARIDLEILAKRLKKDLHGYAGTFDDLNLSYKMN
YPRLYNKAIIEIARKFSEVGLRFGDIEPTEKEIDVIISQGYYIVIDPASSDLKFGQIINP
ENVDSLPEGVIALTGVEALEKLYKAYREKVKEIPIFEVIKESVRNVILKEGTDARLKKII
RRLRLVEGFIESENKPEWMILEVLPVIPPDLRPLIALDGGRFASSDLNDLYRRVINRNNR
LKRLIDLDAPEIIIRNEKRMLQEAVDALIDNGRRGRMVTQNNRPLKSLSDSLRGKEGRFR
QNLLGKRVDYSGRSVIVVGPELQMHECGLPKQMALELFKPFIYRRLEEKGYATSIKSAKK
LVEEKVPEVYECLEEVVKQHPVLLNRAPTLHRMSVQAFEPKLVEGKAIKLHPLVCPPFNA
DFDGDQMAVHVPLSVEAQLESYILMLSTQNILSPAHGKPVTMPSQDIILGVHYMTQELPN
AKGEGKIFGSPEEAVTAYELGTIDLLAKIKVRINGKIVETTAGRIIFNQILPEGYKFVNE
VLDKKKISKLISDIYEKYGNEIAAQTLDKIKEIGFRFATKAAVSISVADLVVPKKKAKIL
EKAIKEAETVWKQYVDGIITKGERHNKIIDIWSQATNEVAKEMFNEIEKSERVENGKKYP
GYFNPVYMMASSGARGSRDQIRQLAGMRGLMAKHSGEFIETPIMSNFREGLSVVEYFIST
YGARKGLADTALKTAVAGYLTRRLADVAQDVIITGEDCGTLKGITVSSIIESGEIVVPFK
DRIIGRYTAEDVYDPYTGELLISANEEITEEVVDKFEKAGIEKVKIRSVLTCEMPHGVCA
KCYGRDLAQRKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHIGGAATAKEVQTQHKATHDG
TVKLQNVKFVVDKKGRKLIINREGSIKILDKEGKTIERFPAPYGAVLYVEDGQEVKEGTI
LAEWEPFSDPIIAEKGGEVELRDVILDVTLKEERDNITGKTIYTITFLRPKDAQLHTPRL
VIKGEDGNEYVYDLPVNTILLIPKENLEEVWDKCFACSEAEKTDIHHKYLQVKKGFKVSE
GDVVAKIPKEKAKVRDIVGGLPRVEELLEAREPKNKAIITEIDGIVKIYEDAKEITLINP
KEGKTETYKVPDTTFVIVKNGSFVKAGQSLVDDGSIVAEFDGMVRLKSEGSRIVVFNKET
GQQKDYKVPKGKFIIVKDNSVVKAGDPLTDGTPNPHDILRVMGIEELAAFLVKEAQIVYR
LQGVEINDKHFEVIIRQILRKVKIVDPGDSRFLLNEIVDKLDLEEEINKVISEGGRPPKA
EPVLVGITKAALTTRSWISAASFQETTRVLADAAVEGKVDPLKGLKENVIIGGIIPAGTG
IKEYSEVEVVLKEEEKEEV |
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| NT seq |
4740 nt +upstreamnt +downstreamnt
gtggaagcaaaagaaagaaaagaaacagttagatttgatgctattagattatctcttgct
tcacctgaaataattaggtcctggtctcatggagaagtaaaaaaaccagaaactcttaac
tatagaacattaaaaccagaaaaagatggactttttgatgcaagaatatttggacctata
aaagactatgaatgtttatgtggaaaatataaaaaaagaaagtatgaaggaacaatttgt
gatagatgtggtgttgaagttacacgttctgatgttagaagagaaagatttggacatata
gagcttgcatctccagttgttcacatatggtatttaaaatctacaccaagtaaaataggt
agtttgttagatttaacatcaagagatattgaaagagttgtttattttgaatcttattta
gtaatagaacatccaacagaggaagaagaggaagcttttgaaaaagaccctaaatcttta
cctctaatggaaggtggccttacaaaatatgtaaaattacacgttgtttctgaagatgaa
tttagagaaagagaatatgagtattcaaatgcagaaaaatacgaatacggaatgggagct
gaaaaagttaaagatgttcttgcaagaatagacttagaaatacttgcaaaaagacttaaa
aaagaccttcatggatatgcaggaacgtttgacgacttaaatctaagctacaaaatgaac
tatccaagactttacaataaagctatcattgaaattgcaagaaagttttcagaagtagga
ctaagatttggagatatagagccaacagaaaaagagatagatgttattatatcacaagga
tattacattgtaatagacccagcttcttcagatttaaaatttggacagatcataaatcca
gaaaatgtagattctctacctgaaggcgttattgctcttacaggggttgaggcattagaa
aaattatataaagcttatagagaaaaagtaaaagaaataccaatttttgaagttatcaaa
gaatctgttagaaatgtaatattaaaagaaggaacagatgcaagactgaagaaaatcatt
agaagattaagacttgtagaaggttttatagagtctgaaaataaacctgaatggatgata
cttgaagttttaccggttattccaccagatttaagacctttgatagctttagatggtggc
agatttgcaagttcagaccttaacgacctttacagaagagttattaaccgaaataaccgt
ttaaaaagacttatcgatttagacgctccagaaatcatcattagaaacgaaaaaagaatg
ctccaagaggctgtcgatgctcttatcgataatggtagacgtggaagaatggtcactcaa
aacaacagaccattaaaatctctttcagactcattaagaggtaaagaaggaagatttaga
caaaaccttcttggcaaaagagtagactactcaggacgttctgtaatcgttgtaggtcct
gaattacagatgcatgaatgcggtcttcctaagcagatggctttagagctattcaaacca
tttatatatagaagacttgaagaaaaaggttatgctacatctataaaatcagctaaaaaa
ttagttgaagaaaaggtaccagaagtttacgaatgtcttgaagaagttgtaaaacaacat
cctgttcttttaaacagggcaccgacattacacagaatgtctgttcaagcattcgagcca
aaattagtagaaggaaaagctataaaacttcatccattagtttgccctccatttaacgca
gactttgatggcgaccagatggctgttcatgtaccactatccgttgaagctcagcttgaa
tcttacatattaatgttatctactcaaaacattctttcaccagcccatggtaaaccagtt
actatgccatcacaggatattattcttggcgttcactatatgactcaagaattaccaaat
gctaaaggtgaaggaaagatatttggctctccggaagaagctgtaactgcttacgaatta
ggcacaatagacttactagctaaaataaaagttagaataaatggcaaaattgttgaaact
acagccggtagaataatcttcaatcaaatacttccggaaggttataaatttgtaaatgaa
gtattagataagaagaaaatttccaaattgatttcagatatttatgaaaaatacggaaat
gagattgctgctcagacattggataaaattaaagaaataggttttagatttgctactaaa
gcagctgtatctatttctgttgctgacttagttgttcctaagaaaaaagctaaaattctt
gagaaagctataaaagaagctgaaacagtttggaagcagtacgtagatggaatcatcaca
aaaggtgagagacacaacaaaatcattgatatatggtctcaggctacaaacgaagtagca
aaagaaatgtttaacgagatagaaaaatctgaaagagtagaaaacggtaaaaaatatccg
ggttatttcaatccggtttatatgatggcatcttctggtgcaagaggtagtagagaccag
ataagacagcttgcaggtatgcgtggtcttatggcaaaacactcaggtgaatttatcgaa
actccaatcatgtcaaactttagagaaggattatctgttgttgagtactttatttcaacg
tacggtgcaagaaaaggtcttgctgacacagctttaaaaactgcagttgcaggatacctt
acaagaagattagcagacgttgcacaggacgttataattacaggagaagactgtggaaca
ttaaaaggtataacggttagctctattattgaaagtggtgaaattgttgtaccatttaaa
gacagaataattggaagatacacagcagaagatgtttatgacccatatactggagaacta
ctaatttctgcaaacgaagaaatcacagaagaagttgttgataaatttgaaaaagcaggt
attgaaaaagtaaaaatcaggtctgtattaacttgtgaaatgcctcatggtgtctgtgca
aaatgctacggcagagacttagcacaaagaaagcttgttgatataggtgaagcggttgga
ataatcgctgctcagtctattggtgaaccgggtactcagcttacaatgagaacgttccac
attggtggtgctgctacagctaaggaagtccaaactcagcataaagcaacccatgatgga
acagtaaaacttcaaaatgtaaaatttgtcgtagataaaaaaggtagaaaattaatcatc
aatagagaaggttcgattaaaatccttgataaagaaggaaaaacaatagaaagatttccg
gcaccatatggagcagttttatacgttgaagatggtcaagaagtaaaagaaggtacaatt
ttagctgaatgggagccatttagcgacccaatcattgcagaaaaaggtggagaagtagaa
ttaagagacgttatcttagatgttacattaaaagaagaaagggataacatcacgggtaaa
acaatttatacaatcacattcttaagaccaaaagacgcacaactccatactccaagattg
gtaattaaaggtgaagatggaaacgagtatgtttatgaccttccagtaaatacaatcttg
ttaattccaaaagaaaatcttgaagaagtttgggataaatgttttgcatgttctgaagca
gaaaaaacagatattcaccacaaatatttacaagttaaaaaaggctttaaggtatcagaa
ggtgatgtagttgctaaaataccaaaagaaaaagcaaaagttagagacatcgttggtggc
ttaccaagagttgaagagttgttagaagcaagagaacctaaaaataaagctatcatcaca
gaaatagacggtattgtaaaaatctacgaagatgcaaaagaaattacattaataaatcct
aaggaaggaaaaacagagacttacaaagttccggataccacgtttgtcattgtaaaaaat
ggttcctttgtaaaagctggacaaagcttagttgatgatggaagtatcgtcgcagaattt
gatggaatggtaagactaaaaagtgaaggttcaagaatagttgtgtttaataaagaaact
ggacaacagaaagattacaaagttccaaaaggaaaattcattattgttaaagataactct
gttgtaaaagctggagaccctctaacagatggtactccaaacccacacgacatattaaga
gtaatgggtatagaagagcttgcggcattcttagtaaaagaagcacaaattgtttacaga
ttacaaggtgttgaaatcaacgataaacactttgaagtaatcataagacaaatacttaga
aaagttaaaattgtagacccaggagatagcagatttttactcaacgagatagtagacaaa
cttgaccttgaagaagagattaataaggtaatttctgaaggtggaagaccaccaaaagct
gagcctgttcttgttggtattacaaaagctgcattaactacaagaagctggatttctgca
gcgtcattccaagaaacaacaagagttcttgcagatgcggcggttgaaggaaaagtagac
ccattaaaaggattgaaggaaaacgttatcattggtggaattattccagccggtacaggt
ataaaagagtattcggaagttgaagtagtgttaaaagaagaagaaaaagaggaagtgtaa |
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