Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0830
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Entry
SYO3AOP1_0830 CDS
T00715
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYO3AOP1_0830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_0830
Enzymes [BR:
sul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYO3AOP1_0830
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYO3AOP1_0830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Zn_ribbon_TFIIB
DEAD
Zn_ribbon_6
AlkZ-rel
Cas12f1-like_TNB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ACD66463
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All DBs
Position
868387..870372
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AA seq
661 aa
AA seq
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MNEIFLEVAVPVPLYQTFWYRFQTESLENFVGRRVIVSFKSTKSYGLVIGISNSIKNVPA
EYRSKLKDIIKIDDFQVFTEKEINIIKKISDYYLSPIGLTIDFFIPNILREKAIKDPLAF
KVFNINENVELKKISETAKKIIQIIQENQEVSYEDLLSLGFSKKSIKSLLDKGILIPVES
SIKIKTPVFRQPKTADYTPKLLESQMYVYDRFYFKNRLKAYTSLIKKYVKTNKSVLIVVP
SIAFGNILYKDLSQKFENVYFYHDGISPKLQFEIFKEITNNPSIVIGTVSSLLIPIKDLN
LLILEQEHSSAYKVLRSPRFETKRVLYYIHKEKNIPIILASSILSIESYLINATNLKKDK
DVIKSYVEINPFKSINKTLNKLQSLISKKGRTLILTNKSYYSGFIYCPRCGWEAVCPTCD
VPLKTYIQNNTKIFRCPSCKKRFEYFKTCPECDFKLKETGFGKEFVFEFLKKSDKLRKLL
DSNKIIVESSLKDILQFESFDMVINLYPDFILDLPDYRSNEKFLRSVISPLTVAKDNYII
FSNTLESWLAENIGAKSLDVNQILENFYKKETIYRKKNKLPPFLKLVRFKIVFKPTQKEY
VEKVLREISSLKVYSFSQKSNSFNYYFEYKSEKEKEMIKVLAEKLLKKGVDVIIEVDPKS
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgaaatctttcttgaagtagctgttcctgtaccactttaccaaactttttggtac
aggtttcaaactgagtccttagaaaattttgtaggcagaagagtaattgtttcatttaag
agtactaaatcctatggattagtcattggaatatctaattctatcaaaaacgttccggca
gaatatagaagcaaactaaaagatatcataaaaatcgatgattttcaagtatttacagaa
aaagaaataaacatcattaaaaaaatttcagattattatctatctccgataggtttgacg
atagattttttcattccaaatatcttaagagaaaaagccataaaagacccgcttgctttt
aaagtttttaacattaatgaaaatgtagagcttaaaaaaatctcagaaacagctaaaaaa
attattcaaatcattcaagaaaatcaggaagtatcttatgaagatttattatcacttgga
ttttctaaaaaaagtattaagagtttgcttgataaaggtattcttattcctgttgaaagt
agtataaaaataaaaactcctgtctttagacagccaaaaacggctgactatactccaaaa
ctattagaaagtcagatgtatgtttatgatagattttatttcaaaaataggttaaaagct
tacacatcgcttataaaaaaatatgttaaaacaaataaaagtgtgttgattgtcgttcca
agcattgcctttggaaatatactttataaagatttatctcaaaagtttgaaaatgtatat
ttttatcatgatggaattagtccaaagcttcagtttgaaatttttaaagagataacaaat
aatccatctattgtgatcggaacagtatcttctttgcttattcctataaaagacttaaat
ctcttaattcttgagcaagaacattcatcagcttacaaagttttaaggtctccaagattt
gagacaaaaagggttttatattacattcataaagaaaaaaatattccaatcatcttagca
tcttctatcttatccatcgaaagctacttgattaatgctacaaatctaaaaaaagataaa
gatgttataaaatcttatgtagaaatcaatccttttaagtctatcaataaaactttaaat
aaactccaaagcttgatttcaaagaaaggaagaactctgattttaactaataaaagctat
tactccgggttcatttactgtccaagatgtggatgggaagcagtttgtccaacctgtgat
gttccgctaaaaacttacattcaaaataacactaaaattttcagatgtccatcttgtaaa
aaaaggtttgaatactttaaaacctgtcctgaatgtgattttaagctaaaggagactgga
tttggaaaagagtttgtttttgaatttcttaaaaaaagtgataaacttagaaagctactg
gattctaataaaatcattgtagaatcaagtttaaaggatatattgcagtttgaaagcttt
gatatggttataaatctttatcctgattttattttagatttacctgattataggtcaaat
gaaaaatttttaaggtctgtaatatctccgttaacagtagctaaggataattatatcatt
ttttctaatacactggagagttggcttgcggaaaacattggagctaaatccttggatgta
aatcaaattttagaaaatttttataaaaaagaaactatctatagaaagaaaaacaagcta
ccaccgtttttaaagcttgtaagatttaaaattgtgtttaaaccaactcaaaaagagtat
gttgaaaaggtattgagagaaatctcaagcttgaaagtatattctttctctcaaaaatca
aatagttttaattattattttgagtataaatcagaaaaagaaaaggaaatgataaaggtt
ttagctgaaaaactgttaaaaaagggtgtggatgtaattatagaagtcgaccctaagagt
ttttaa
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