Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0961
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Entry
SYO3AOP1_0961 CDS
T00715
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sul03400
]
SYO3AOP1_0961
DNA repair and recombination proteins [BR:
sul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYO3AOP1_0961
Archaeal homologous recombinant proteins
SYO3AOP1_0961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_29
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
DUF724
CCDC22_CC
ABC_tran
HEF_HK
LPP
E6
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
ACD66584
LinkDB
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Position
complement(992969..995644)
Genome browser
AA seq
891 aa
AA seq
DB search
MILKKIVLKNFLIHEDTQLEFSPNGITAIIGENGSGKSSIIEAIQFAFFGDSDKGNLKDL
IKWGRRQAKVELEFETKDGLYKVIKEINKTGKNVNTNSEIFIYENGRFRPYYQKEVNKIL
PKITRLTKKTFFTSVLIKQGEIEGILREKPSERKKIIEDLLNINLYRKIQEQFKENQKRV
KTRLDILQEDILKTDKIQIQQYLEELNNQLEILLKNYEGLNQKLNNIKQKLKEIEDQEKQ
ASYLQSEIGKLEESIKNIKANIENYENQLKEIESLKAKFSELESKFNQLENLEKKSQILS
QIEKLIITKESKEESIKQLEEDLKFLESYKDKAKEFEEKQNSLKQIESKLAEINQIKGEI
SQLNKQIEKINSDIQKKKQEYMAIVDDLTKIYQKFQTLKLNPLMIKEYKEANKLKLQQLE
KEIKELEDKLSQVRTEGKALRESLESIQKLEGKCPTCLRPIEEHQKEELIKELEQAIEIK
RKEYKELDEKLKSSKEEKEKQDKIKELLTELEPIYKSIKEKEDELKQAREKFNIFTHKLK
NEENLRKQKEEIDQFIKEHQKDYGFFKNLQSKNIQKSYENLNKEIKELSEKINNLLKQID
FSASSKEEIEIKLRETKEKIEELKPYREEYLKAKQEIEEESKIKENIKKFEAELENKNKK
LLELREKLDKIELDKLLKEKEFLKEKEDNYQKELLELSGKIGSLKNEINNYEKSIEELKN
KEQEIETLKIKLEKYSKAIESIDYVCKVLEEKALYLLPKYTEELFEKFGFTQFSRLRFTE
KYDIIFDALEVGASNIEVSSEALSGGQRIALAIALRLAIARLFNEKTDFLILDEPTIHLD
QERKRELIDLLGDFKEKNFLKQLIVITHDEEVEDRADLIYKVNKGRVEVVE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatattgaaaaagattgttctaaaaaactttttaatacatgaagatactcaattagaa
ttttctccaaatggtataactgcaattattggtgaaaatgggtcagggaaaagttcaatc
attgaagctattcaatttgcgttttttggagattcagataaaggaaatcttaaagactta
attaaatggggaagaagacaggcaaaggtagagcttgaatttgaaacaaaagatggactt
tataaagtaataaaagagataaataaaacaggaaaaaatgtaaatacaaattcagaaatt
tttatatatgaaaatggcagatttagaccgtattatcaaaaagaggtaaataaaattctt
ccaaaaataacaagactgactaaaaaaacattttttacatcggtcttaataaaacaaggt
gaaatagaagggattcttagagaaaagccatctgaaagaaaaaaaatcatagaagacctt
ttaaacataaatctttacagaaaaattcaagaacagtttaaagaaaatcaaaaaagagta
aaaacaaggttagatatcttgcaggaagatattttaaaaactgacaaaattcagattcag
caatatcttgaagaattaaacaatcaattagagattttattaaaaaattacgaaggccta
aaccaaaagctaaataatatcaagcaaaaattaaaagaaatagaagaccaagaaaaacaa
gcttcatacttacaatcagaaattggaaagttagaagaaagtataaaaaacataaaagca
aatattgaaaattatgaaaatcagctgaaagagattgaaagtttaaaggctaagttttca
gaattagaaagtaaatttaaccaacttgaaaatcttgaaaagaaaagtcagattctaagc
caaatagaaaagttaatcattacaaaagaaagcaaagaagaatcaatcaaacagcttgaa
gaagatttaaaatttttagaaagctataaagacaaagctaaagagtttgaagagaaacaa
aactctttaaagcaaattgaatcaaaattggctgaaataaaccaaattaaaggtgaaatc
tcacagctaaacaaacaaattgagaagataaattcagatatccaaaaaaagaaacaagaa
tatatggcaattgtagatgacctgactaagatatatcaaaaattccagactctaaaacta
aatcctttaatgataaaagaatataaagaagctaataaattaaaacttcagcagttagaa
aaagagataaaagagttggaagataaattaagccaagttagaactgaaggtaaggcttta
agagaaagtttagaaagtatccagaagctggaaggaaaatgtccaacctgtctaagacca
atcgaagaacatcaaaaagaagagctaattaaagagcttgaacaagcaattgaaataaaa
agaaaagagtataaagagttagacgaaaaactaaaatcttcaaaagaagaaaaggaaaag
caagataaaataaaagagttattaaccgaattagagccaatttataaatcaataaaagaa
aaagaagacgaattaaagcaagcaagagaaaaatttaacatttttactcataagctaaaa
aatgaagaaaatttgaggaaacagaaagaagaaattgaccagtttataaaagaacatcaa
aaagattatggattttttaaaaatctacaatcaaaaaatattcaaaaaagctatgaaaac
ctaaataaagaaattaaagaactttcagagaagataaacaacctattaaaacaaatagat
ttttctgcatcgtcaaaagaagagattgaaattaagctaagagaaacaaaagagaaaatt
gaagaattaaagccgtatagagaagagtatttaaaagcaaagcaagaaattgaagaagag
agtaaaattaaagaaaacataaaaaaatttgaagcagagcttgaaaataaaaataaaaaa
ctcttagaactaagagaaaagttagataaaatagagttagacaagctattaaaagaaaaa
gaatttcttaaagaaaaagaagataattatcaaaaagagcttttagaactatccggaaaa
ataggtagcttgaagaatgaaattaataattatgaaaaatctatcgaagagctaaaaaat
aaagagcaagagatagaaactttgaaaataaagcttgagaaatacagcaaagctatagaa
tctatagattatgtatgcaaagtgcttgaagaaaaggcattatacttactacctaagtat
acagaagagctttttgaaaagtttggatttactcaattttcaagactaagatttacagaa
aaatatgatattatctttgatgctttagaggtcggagcaagtaatatagaggtttccagt
gaagctttaagcggtggacaaagaatagcacttgcaatagcgttaagattggcaatagca
agactttttaatgaaaagacagactttttaatcttagatgagccaacaattcatttagac
caagaaagaaagagggagcttatagatttacttggagactttaaagaaaaaaatttttta
aaacagctaatagttataactcacgatgaggaggtagaagatagagctgatttaatatat
aaagttaataaaggtagagtggaggtggtagaatga
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